Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RSPO3Q9BXY4 AL031432.4-201ENST00000641729 2190 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 LINC02228-202ENST00000641261 2489 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AL022323.5-201ENST00000624101 2059 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC008132.1-202ENST00000342005 1389 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC008764.8-201ENST00000623966 2717 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC106827.1-201ENST00000366454 431 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC132825.4-202ENST00000578792 434 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 MIR4538-201ENST00000581377 78 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 AL049840.2-201ENST00000602722 535 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 MIR6769A-201ENST00000617340 73 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 NAP1L6-202ENST00000641404 1222 ntBASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RSPO3Q9BXY4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 RBM22P2-201ENST00000393978 1814 ntBASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RSPO3Q9BXY4 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 POM121L4P-202ENST00000427789 1891 ntBASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 GGTLC4P-201ENST00000402176 664 ntBASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 RPL3P2-204ENST00000413027 1203 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms