Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.48□□□□□ -0.09
ERVFC1P60507 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.48□□□□□ -0.09
ERVFC1P60507 AC245140.2-201ENST00000624054 1939 ntBASIC14.48□□□□□ -0.09
ERVFC1P60507 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ERVFC1P60507 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ERVFC1P60507 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC14.48□□□□□ -0.09
ERVFC1P60507 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ERVFC1P60507 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.47□□□□□ -0.09
ERVFC1P60507 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 HSD3BP1-201ENST00000286193 1111 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.47□□□□□ -0.09
ERVFC1P60507 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 AHCYP3-201ENST00000420053 1279 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.47□□□□□ -0.09
ERVFC1P60507 RHOQP2-201ENST00000449922 579 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 IGHVII-74-1-201ENST00000517572 241 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 URB1-AS1-201ENST00000534991 831 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.47□□□□□ -0.09
ERVFC1P60507 MIR3940-201ENST00000579148 102 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 PRR20FP-201ENST00000603320 180 ntBASIC14.47□□□□□ -0.09
ERVFC1P60507 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
ERVFC1P60507 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.47□□□□□ -0.09
ERVFC1P60507 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.47□□□□□ -0.09
ERVFC1P60507 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ERVFC1P60507 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.46□□□□□ -0.09
ERVFC1P60507 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ERVFC1P60507 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ERVFC1P60507 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.46□□□□□ -0.09
ERVFC1P60507 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.46□□□□□ -0.09
ERVFC1P60507 RCC2P5-201ENST00000492126 1487 ntBASIC14.46□□□□□ -0.09
ERVFC1P60507 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.46□□□□□ -0.09
ERVFC1P60507 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.46□□□□□ -0.09
ERVFC1P60507 AL359092.2-201ENST00000423330 585 ntBASIC14.46□□□□□ -0.09
ERVFC1P60507 MAGEA7P-201ENST00000436482 942 ntBASIC14.46□□□□□ -0.09
ERVFC1P60507 AC005077.3-201ENST00000449614 213 ntBASIC14.46□□□□□ -0.09
ERVFC1P60507 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.46□□□□□ -0.09
ERVFC1P60507 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.46□□□□□ -0.09
ERVFC1P60507 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.46□□□□□ -0.09
ERVFC1P60507 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.46□□□□□ -0.09
ERVFC1P60507 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC14.46□□□□□ -0.09
ERVFC1P60507 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.46□□□□□ -0.09
ERVFC1P60507 CCND3P2-201ENST00000579393 537 ntBASIC14.46□□□□□ -0.09
ERVFC1P60507 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14.46□□□□□ -0.09
ERVFC1P60507 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
ERVFC1P60507 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.46□□□□□ -0.09
ERVFC1P60507 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.46□□□□□ -0.09
ERVFC1P60507 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ERVFC1P60507 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms