Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.42□□□□□ -0.26
HLCSP50747 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.42□□□□□ -0.26
HLCSP50747 RHOQP1-201ENST00000555758 579 ntBASIC13.42□□□□□ -0.26
HLCSP50747 CHMP4BP1-201ENST00000556017 588 ntBASIC13.42□□□□□ -0.26
HLCSP50747 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.42□□□□□ -0.26
HLCSP50747 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.42□□□□□ -0.26
HLCSP50747 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HLCSP50747 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HLCSP50747 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.42□□□□□ -0.26
HLCSP50747 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLCSP50747 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 PEG13-201ENST00000631594 5667 ntBASIC13.41□□□□□ -0.26
HLCSP50747 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HLCSP50747 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 AC106818.1-201ENST00000623223 3242 ntBASIC13.41□□□□□ -0.26
HLCSP50747 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
HLCSP50747 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HLCSP50747 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.41□□□□□ -0.26
HLCSP50747 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 AL596276.2-201ENST00000447525 331 ntBASIC13.41□□□□□ -0.26
HLCSP50747 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 RN7SL720P-201ENST00000488178 304 ntBASIC13.41□□□□□ -0.26
HLCSP50747 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.41□□□□□ -0.26
HLCSP50747 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.41□□□□□ -0.26
HLCSP50747 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.41□□□□□ -0.26
HLCSP50747 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 AC097724.1-201ENST00000609581 426 ntBASIC13.41□□□□□ -0.26
HLCSP50747 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
HLCSP50747 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.41□□□□□ -0.26
HLCSP50747 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HLCSP50747 KRT8P21-201ENST00000430398 1491 ntBASIC13.41□□□□□ -0.26
HLCSP50747 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HLCSP50747 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.41□□□□□ -0.26
HLCSP50747 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HLCSP50747 AHCYP4-201ENST00000419201 1315 ntBASIC13.4□□□□□ -0.26
HLCSP50747 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
HLCSP50747 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.4□□□□□ -0.26
HLCSP50747 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 AC239868.1-201ENST00000369385 493 ntBASIC13.4□□□□□ -0.26
HLCSP50747 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms