Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS27P42677 AC104758.3-203ENST00000562938 2123 ntBASIC12.44□□□□□ -0.42
RPS27P42677 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
RPS27P42677 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.44□□□□□ -0.42
RPS27P42677 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS27P42677 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS27P42677 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPS27P42677 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RPS27P42677 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 AC020917.4-201ENST00000623994 1999 ntBASIC12.43□□□□□ -0.42
RPS27P42677 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.43□□□□□ -0.42
RPS27P42677 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
RPS27P42677 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 PCDHB19P-202ENST00000625133 2914 ntBASIC12.43□□□□□ -0.42
RPS27P42677 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 AC093462.1-201ENST00000621167 1683 ntBASIC12.43□□□□□ -0.42
RPS27P42677 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RPS27P42677 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.43□□□□□ -0.42
RPS27P42677 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.43□□□□□ -0.42
RPS27P42677 GOLGA2P8-201ENST00000505201 779 ntBASIC12.43□□□□□ -0.42
RPS27P42677 RNA5SP412-201ENST00000516234 123 ntBASIC12.43□□□□□ -0.42
RPS27P42677 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.43□□□□□ -0.42
RPS27P42677 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.43□□□□□ -0.42
RPS27P42677 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.43□□□□□ -0.42
RPS27P42677 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.43□□□□□ -0.42
RPS27P42677 MIR3615-201ENST00000581999 87 ntBASIC12.43□□□□□ -0.42
RPS27P42677 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.43□□□□□ -0.42
RPS27P42677 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 BEND3P3-201ENST00000611030 2440 ntBASIC12.43□□□□□ -0.42
RPS27P42677 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.43□□□□□ -0.42
RPS27P42677 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.43□□□□□ -0.42
RPS27P42677 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RPS27P42677 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPS27P42677 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.43□□□□□ -0.42
RPS27P42677 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RPS27P42677 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.42□□□□□ -0.42
RPS27P42677 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.42□□□□□ -0.42
RPS27P42677 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.42□□□□□ -0.42
RPS27P42677 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.42□□□□□ -0.42
RPS27P42677 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RPS27P42677 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPS27P42677 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RPS27P42677 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms