Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CCL1P22362 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL1P22362 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL1P22362 AC132825.4-202ENST00000578792 434 ntBASIC11.98□□□□□ -0.49
CCL1P22362 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL1P22362 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL1P22362 AC026740.1-201ENST00000607068 791 ntBASIC11.98□□□□□ -0.49
CCL1P22362 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL1P22362 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.98□□□□□ -0.49
CCL1P22362 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL1P22362 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL1P22362 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL1P22362 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 MEX3B-202ENST00000558133 4333 ntBASIC11.97□□□□□ -0.49
CCL1P22362 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CCL1P22362 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.97□□□□□ -0.49
CCL1P22362 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 AC106827.1-201ENST00000366454 431 ntBASIC11.97□□□□□ -0.49
CCL1P22362 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CCL1P22362 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.97□□□□□ -0.49
CCL1P22362 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
CCL1P22362 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.97□□□□□ -0.49
CCL1P22362 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 MIR4326-201ENST00000582203 59 ntBASIC11.97□□□□□ -0.49
CCL1P22362 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.97□□□□□ -0.49
CCL1P22362 AL645939.5-201ENST00000606834 243 ntBASIC11.97□□□□□ -0.49
CCL1P22362 MEG3_2.1-201ENST00000611456 105 ntBASIC11.97□□□□□ -0.49
CCL1P22362 AL805961.1-203ENST00000641078 1258 ntBASIC11.97□□□□□ -0.49
CCL1P22362 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 AL031595.1-201ENST00000623969 4709 ntBASIC11.97□□□□□ -0.49
CCL1P22362 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.97□□□□□ -0.49
CCL1P22362 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.97□□□□□ -0.49
CCL1P22362 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CCL1P22362 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CCL1P22362 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CCL1P22362 ERG-211ENST00000453032 1595 ntTSL 2 BASIC11.96□□□□□ -0.49
CCL1P22362 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.96□□□□□ -0.49
CCL1P22362 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.96□□□□□ -0.49
CCL1P22362 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 AC138969.2-201ENST00000532739 9932 ntBASIC11.96□□□□□ -0.49
CCL1P22362 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC11.96□□□□□ -0.49
CCL1P22362 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.96□□□□□ -0.49
CCL1P22362 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CCL1P22362 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.96□□□□□ -0.49
CCL1P22362 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CCL1P22362 MBP-201ENST00000354542 575 ntTSL 2 BASIC11.96□□□□□ -0.49
CCL1P22362 MIR645-201ENST00000385283 94 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms