Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PDGFBP01127 AP001331.1-201ENST00000413008 1015 ntBASIC13.76□□□□□ -0.21
PDGFBP01127 Z84721.1-201ENST00000438841 372 ntBASIC13.76□□□□□ -0.21
PDGFBP01127 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC13.76□□□□□ -0.21
PDGFBP01127 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC13.76□□□□□ -0.21
PDGFBP01127 AC022447.6-201ENST00000515522 438 ntBASIC13.76□□□□□ -0.21
PDGFBP01127 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.76□□□□□ -0.21
PDGFBP01127 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC13.76□□□□□ -0.21
PDGFBP01127 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC13.76□□□□□ -0.21
PDGFBP01127 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC13.76□□□□□ -0.21
PDGFBP01127 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PDGFBP01127 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.76□□□□□ -0.21
PDGFBP01127 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDGFBP01127 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.76□□□□□ -0.21
PDGFBP01127 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 IMPDH1P5-201ENST00000439688 1540 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.75□□□□□ -0.21
PDGFBP01127 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 RPSAP61-201ENST00000412542 878 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 AC105443.1-201ENST00000433754 712 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.75□□□□□ -0.21
PDGFBP01127 AC012066.1-201ENST00000439252 694 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.75□□□□□ -0.21
PDGFBP01127 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC13.75□□□□□ -0.21
PDGFBP01127 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PDGFBP01127 MTHFD2P7-201ENST00000483867 983 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 AACSP1-202ENST00000521412 1095 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC13.75□□□□□ -0.21
PDGFBP01127 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
PDGFBP01127 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC13.75□□□□□ -0.21
PDGFBP01127 AC006273.1-201ENST00000606966 861 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
PDGFBP01127 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDGFBP01127 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms