Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 AC100827.2-201ENST00000563214 1194 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 AL023803.2-201ENST00000620080 638 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RFPL1O75677 MIR6727-201ENST00000620702 65 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.04□□□□□ -0.16
RFPL1O75677 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 AHCYP4-201ENST00000419201 1315 ntBASIC14.04□□□□□ -0.16
RFPL1O75677 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RFPL1O75677 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RFPL1O75677 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.04□□□□□ -0.16
RFPL1O75677 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RFPL1O75677 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RFPL1O75677 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.03□□□□□ -0.16
RFPL1O75677 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 AC102953.2-201ENST00000609755 3026 ntBASIC14.03□□□□□ -0.16
RFPL1O75677 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.03□□□□□ -0.16
RFPL1O75677 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.03□□□□□ -0.16
RFPL1O75677 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.03□□□□□ -0.16
RFPL1O75677 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.03□□□□□ -0.16
RFPL1O75677 AC005730.2-201ENST00000564549 1184 ntBASIC14.03□□□□□ -0.16
RFPL1O75677 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 AC097724.1-201ENST00000609581 426 ntBASIC14.03□□□□□ -0.16
RFPL1O75677 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.03□□□□□ -0.16
RFPL1O75677 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RFPL1O75677 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RFPL1O75677 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RFPL1O75677 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.02□□□□□ -0.16
RFPL1O75677 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 AC018629.1-201ENST00000623381 1736 ntBASIC14.02□□□□□ -0.16
RFPL1O75677 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.02□□□□□ -0.16
RFPL1O75677 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RFPL1O75677 KRT8P29-201ENST00000420409 1371 ntBASIC14.02□□□□□ -0.17
RFPL1O75677 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFPL1O75677 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFPL1O75677 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFPL1O75677 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFPL1O75677 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.02□□□□□ -0.17
RFPL1O75677 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.02□□□□□ -0.17
RFPL1O75677 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.02□□□□□ -0.17
RFPL1O75677 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms