Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 AL162393.1-201ENST00000437852 946 ntBASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MAP1LC3AQ9H492 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 SLC25A24-204ENST00000569674 2357 ntBASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.31■□□□□ 0.2
MAP1LC3AQ9H492 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 AC092053.2-201ENST00000640557 1818 ntBASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
MAP1LC3AQ9H492 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 C11orf96-202ENST00000528572 1834 ntBASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 AC025884.2-201ENST00000553429 711 ntBASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.29■□□□□ 0.2
MAP1LC3AQ9H492 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 KRT18P10-201ENST00000388836 1287 ntBASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MAP1LC3AQ9H492 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 DUX4L11-201ENST00000611504 1267 ntBASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 DUX4L12-201ENST00000614593 1267 ntBASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 DUX4L14-201ENST00000621227 1267 ntBASIC16.27■□□□□ 0.2
MAP1LC3AQ9H492 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MAP1LC3AQ9H492 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms