Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SPTBN4Q9H254 AC008550.1-201ENST00000511500 884 ntBASIC21.85■■□□□ 1.09
SPTBN4Q9H254 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SPTBN4Q9H254 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.85■■□□□ 1.09
SPTBN4Q9H254 DUX4L4-201ENST00000566884 1269 ntBASIC21.85■■□□□ 1.09
SPTBN4Q9H254 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.85■■□□□ 1.09
SPTBN4Q9H254 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPTBN4Q9H254 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.84■■□□□ 1.09
SPTBN4Q9H254 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPTBN4Q9H254 AC005181.1-201ENST00000604782 1256 ntBASIC21.84■■□□□ 1.09
SPTBN4Q9H254 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SPTBN4Q9H254 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPTBN4Q9H254 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SPTBN4Q9H254 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.83■■□□□ 1.09
SPTBN4Q9H254 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
SPTBN4Q9H254 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SPTBN4Q9H254 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
SPTBN4Q9H254 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.83■■□□□ 1.08
SPTBN4Q9H254 AL158047.1-201ENST00000445918 881 ntBASIC21.83■■□□□ 1.08
SPTBN4Q9H254 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.83■■□□□ 1.08
SPTBN4Q9H254 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.83■■□□□ 1.08
SPTBN4Q9H254 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 AC007322.1-201ENST00000426983 750 ntBASIC21.82■■□□□ 1.08
SPTBN4Q9H254 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 DUX4L16-201ENST00000555130 1264 ntBASIC21.82■■□□□ 1.08
SPTBN4Q9H254 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPTBN4Q9H254 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.81■■□□□ 1.08
SPTBN4Q9H254 AC142381.4-202ENST00000563973 229 ntBASIC21.81■■□□□ 1.08
SPTBN4Q9H254 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 DRD5P2-201ENST00000421395 2012 ntBASIC21.8■■□□□ 1.08
SPTBN4Q9H254 AC073912.3-201ENST00000624414 853 ntBASIC21.8■■□□□ 1.08
SPTBN4Q9H254 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 LINC01003-201ENST00000564834 1764 ntBASIC21.8■■□□□ 1.08
SPTBN4Q9H254 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPTBN4Q9H254 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTBN4Q9H254 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPTBN4Q9H254 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.79■■□□□ 1.08
SPTBN4Q9H254 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SPTBN4Q9H254 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 AC133041.1-202ENST00000642053 222 ntBASIC21.78■■□□□ 1.08
SPTBN4Q9H254 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
SPTBN4Q9H254 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 UNC93B4-201ENST00000505679 747 ntBASIC21.77■■□□□ 1.08
SPTBN4Q9H254 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPTBN4Q9H254 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SPTBN4Q9H254 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.76■■□□□ 1.07
SPTBN4Q9H254 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms