Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
CLPBQ9H078 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CLPBQ9H078 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CLPBQ9H078 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLPBQ9H078 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.45■■□□□ 1.18
CLPBQ9H078 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLPBQ9H078 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLPBQ9H078 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CLPBQ9H078 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLPBQ9H078 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLPBQ9H078 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLPBQ9H078 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLPBQ9H078 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.44■■□□□ 1.18
CLPBQ9H078 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.44■■□□□ 1.18
CLPBQ9H078 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.44■■□□□ 1.18
CLPBQ9H078 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLPBQ9H078 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLPBQ9H078 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.43■■□□□ 1.18
CLPBQ9H078 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLPBQ9H078 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CLPBQ9H078 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CLPBQ9H078 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLPBQ9H078 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CLPBQ9H078 AC024257.2-201ENST00000549699 147 ntBASIC22.43■■□□□ 1.18
CLPBQ9H078 AL031432.3-201ENST00000607698 485 ntBASIC22.43■■□□□ 1.18
CLPBQ9H078 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.43■■□□□ 1.18
CLPBQ9H078 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CLPBQ9H078 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLPBQ9H078 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.43■■□□□ 1.18
CLPBQ9H078 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLPBQ9H078 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLPBQ9H078 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLPBQ9H078 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 AC135279.3-201ENST00000610945 1311 ntBASIC22.42■■□□□ 1.18
CLPBQ9H078 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.42■■□□□ 1.18
CLPBQ9H078 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.42■■□□□ 1.18
CLPBQ9H078 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.42■■□□□ 1.18
CLPBQ9H078 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.42■■□□□ 1.18
CLPBQ9H078 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CLPBQ9H078 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLPBQ9H078 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CLPBQ9H078 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.41■■□□□ 1.18
CLPBQ9H078 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CLPBQ9H078 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.41■■□□□ 1.18
CLPBQ9H078 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CLPBQ9H078 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLPBQ9H078 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLPBQ9H078 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.4■■□□□ 1.18
CLPBQ9H078 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLPBQ9H078 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLPBQ9H078 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLPBQ9H078 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLPBQ9H078 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.4■■□□□ 1.18
CLPBQ9H078 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CLPBQ9H078 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.4■■□□□ 1.18
CLPBQ9H078 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.4■■□□□ 1.18
CLPBQ9H078 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CLPBQ9H078 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CLPBQ9H078 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.39■■□□□ 1.18
CLPBQ9H078 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.39■■□□□ 1.18
CLPBQ9H078 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CLPBQ9H078 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CLPBQ9H078 ANOS2P-203ENST00000472227 1816 ntBASIC22.39■■□□□ 1.17
CLPBQ9H078 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.39■■□□□ 1.17
CLPBQ9H078 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLPBQ9H078 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
CLPBQ9H078 SUDS3P1-201ENST00000505831 966 ntBASIC22.39■■□□□ 1.17
CLPBQ9H078 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
CLPBQ9H078 AC142381.2-201ENST00000566120 298 ntBASIC22.39■■□□□ 1.17
CLPBQ9H078 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.39■■□□□ 1.17
CLPBQ9H078 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.39■■□□□ 1.17
CLPBQ9H078 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLPBQ9H078 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.39■■□□□ 1.17
CLPBQ9H078 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLPBQ9H078 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CLPBQ9H078 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLPBQ9H078 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CLPBQ9H078 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.38■■□□□ 1.17
CLPBQ9H078 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLPBQ9H078 AC009102.2-201ENST00000606772 1639 ntBASIC22.38■■□□□ 1.17
CLPBQ9H078 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms