Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.46■□□□□ 0.39
TRGV9Q99603 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRGV9Q99603 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.46■□□□□ 0.39
TRGV9Q99603 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRGV9Q99603 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRGV9Q99603 LINC00565-201ENST00000562710 2331 ntBASIC17.46■□□□□ 0.38
TRGV9Q99603 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.45■□□□□ 0.38
TRGV9Q99603 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TRGV9Q99603 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.45■□□□□ 0.38
TRGV9Q99603 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 ATP5G2P3-201ENST00000429083 425 ntBASIC17.45■□□□□ 0.38
TRGV9Q99603 PVT1_1.1-201ENST00000615125 194 ntBASIC17.45■□□□□ 0.38
TRGV9Q99603 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRGV9Q99603 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRGV9Q99603 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRGV9Q99603 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV9Q99603 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TRGV9Q99603 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV9Q99603 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.44■□□□□ 0.38
TRGV9Q99603 CLDN5-201ENST00000403084 2357 ntBASIC17.44■□□□□ 0.38
TRGV9Q99603 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRGV9Q99603 AC004987.1-201ENST00000428627 508 ntBASIC17.44■□□□□ 0.38
TRGV9Q99603 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRGV9Q99603 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV9Q99603 AL353803.4-201ENST00000565882 1934 ntBASIC17.44■□□□□ 0.38
TRGV9Q99603 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRGV9Q99603 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV9Q99603 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV9Q99603 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.43■□□□□ 0.38
TRGV9Q99603 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRGV9Q99603 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRGV9Q99603 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRGV9Q99603 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV9Q99603 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRGV9Q99603 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRGV9Q99603 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRGV9Q99603 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.42■□□□□ 0.38
TRGV9Q99603 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV9Q99603 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.42■□□□□ 0.38
TRGV9Q99603 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.42■□□□□ 0.38
TRGV9Q99603 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.42■□□□□ 0.38
TRGV9Q99603 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV9Q99603 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
TRGV9Q99603 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV9Q99603 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRGV9Q99603 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV9Q99603 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRGV9Q99603 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV9Q99603 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 TSPY13P-201ENST00000338964 914 ntBASIC17.41■□□□□ 0.38
TRGV9Q99603 AC010980.1-201ENST00000587192 1142 ntBASIC17.41■□□□□ 0.38
TRGV9Q99603 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV9Q99603 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
TRGV9Q99603 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV9Q99603 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV9Q99603 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV9Q99603 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV9Q99603 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV9Q99603 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.4■□□□□ 0.38
TRGV9Q99603 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV9Q99603 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV9Q99603 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRGV9Q99603 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV9Q99603 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV9Q99603 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.4■□□□□ 0.38
TRGV9Q99603 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms