Protein–RNA interactions for Protein: Q8WU76

SCFD2, Sec1 family domain-containing protein 2, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2Q8WU76 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.39■■□□□ 1.66
SCFD2Q8WU76 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SCFD2Q8WU76 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SCFD2Q8WU76 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCFD2Q8WU76 AC126544.1-201ENST00000580842 1059 ntBASIC25.38■■□□□ 1.65
SCFD2Q8WU76 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.38■■□□□ 1.65
SCFD2Q8WU76 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
SCFD2Q8WU76 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.38■■□□□ 1.65
SCFD2Q8WU76 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 AC138932.3-201ENST00000567634 1902 ntBASIC25.37■■□□□ 1.65
SCFD2Q8WU76 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SCFD2Q8WU76 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 SLC47A1P1-202ENST00000449666 945 ntBASIC25.36■■□□□ 1.65
SCFD2Q8WU76 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SCFD2Q8WU76 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
SCFD2Q8WU76 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SCFD2Q8WU76 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 AL139125.2-201ENST00000623134 1869 ntBASIC25.33■■□□□ 1.65
SCFD2Q8WU76 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.33■■□□□ 1.65
SCFD2Q8WU76 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SCFD2Q8WU76 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SCFD2Q8WU76 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SCFD2Q8WU76 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCFD2Q8WU76 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.32■■□□□ 1.64
SCFD2Q8WU76 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCFD2Q8WU76 AC133637.1-201ENST00000624115 1537 ntBASIC25.32■■□□□ 1.64
SCFD2Q8WU76 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SCFD2Q8WU76 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.32■■□□□ 1.64
SCFD2Q8WU76 FP325331.1-202ENST00000623531 1380 ntBASIC25.31■■□□□ 1.64
SCFD2Q8WU76 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 AL162430.1-201ENST00000480705 870 ntBASIC25.31■■□□□ 1.64
SCFD2Q8WU76 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 AL499627.2-201ENST00000606283 725 ntBASIC25.31■■□□□ 1.64
SCFD2Q8WU76 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCFD2Q8WU76 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCFD2Q8WU76 TSPY26P-201ENST00000476365 1326 ntBASIC25.3■■□□□ 1.64
SCFD2Q8WU76 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCFD2Q8WU76 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCFD2Q8WU76 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms