Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BBS1Q8NFJ9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
BBS1Q8NFJ9 AC127496.7-201ENST00000625110 1798 ntBASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 AC139795.1-202ENST00000500444 432 ntBASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 AC022616.5-201ENST00000518796 181 ntBASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.13■□□□□ 0.81
BBS1Q8NFJ9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 AF131216.4-201ENST00000638924 1588 ntBASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BBS1Q8NFJ9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BBS1Q8NFJ9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 AC242852.2-201ENST00000615738 1807 ntBASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
BBS1Q8NFJ9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BBS1Q8NFJ9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BBS1Q8NFJ9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
BBS1Q8NFJ9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BBS1Q8NFJ9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BBS1Q8NFJ9 AL353803.4-201ENST00000565882 1934 ntBASIC20.08■□□□□ 0.8
BBS1Q8NFJ9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 AC007375.3-201ENST00000600936 2314 ntBASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BBS1Q8NFJ9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms