Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK4Q8NE63 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
HIPK4Q8NE63 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK4Q8NE63 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK4Q8NE63 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HIPK4Q8NE63 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HIPK4Q8NE63 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK4Q8NE63 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK4Q8NE63 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
HIPK4Q8NE63 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK4Q8NE63 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 RNF126P1-201ENST00000567452 1320 ntBASIC21.61■■□□□ 1.05
HIPK4Q8NE63 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.61■■□□□ 1.05
HIPK4Q8NE63 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 RPS2P7-201ENST00000447334 885 ntBASIC21.6■■□□□ 1.05
HIPK4Q8NE63 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 SLC25A24-204ENST00000569674 2357 ntBASIC21.6■■□□□ 1.05
HIPK4Q8NE63 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIPK4Q8NE63 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIPK4Q8NE63 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK4Q8NE63 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK4Q8NE63 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK4Q8NE63 AC018755.3-202ENST00000596210 929 ntBASIC21.58■■□□□ 1.05
HIPK4Q8NE63 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIPK4Q8NE63 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HIPK4Q8NE63 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.58■■□□□ 1.04
HIPK4Q8NE63 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
HIPK4Q8NE63 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HIPK4Q8NE63 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 AC242852.2-201ENST00000615738 1807 ntBASIC21.57■■□□□ 1.04
HIPK4Q8NE63 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.57■■□□□ 1.04
HIPK4Q8NE63 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HIPK4Q8NE63 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HIPK4Q8NE63 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms