Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC105Q8IYK2 AL162430.1-201ENST00000480705 870 ntBASIC24■■□□□ 1.43
CCDC105Q8IYK2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
CCDC105Q8IYK2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CCDC105Q8IYK2 AL136967.2-201ENST00000623968 743 ntBASIC24■■□□□ 1.43
CCDC105Q8IYK2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC105Q8IYK2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCDC105Q8IYK2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC105Q8IYK2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 AF213884.3-201ENST00000563833 479 ntBASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 C9orf163-202ENST00000624034 2573 ntBASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CCDC105Q8IYK2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 SRD5A1P1-201ENST00000442297 786 ntBASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 SNX5-217ENST00000606557 1087 ntBASIC23.97■■□□□ 1.43
CCDC105Q8IYK2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 AC087623.3-201ENST00000607047 1098 ntBASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC105Q8IYK2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.95■■□□□ 1.43
CCDC105Q8IYK2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCDC105Q8IYK2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCDC105Q8IYK2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 MIR939-201ENST00000401314 82 ntBASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 MIR6722-201ENST00000617286 78 ntBASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC105Q8IYK2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC105Q8IYK2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC105Q8IYK2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CCDC105Q8IYK2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC105Q8IYK2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms