Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VRK2Q86Y07 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VRK2Q86Y07 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VRK2Q86Y07 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.71■□□□□ 0.91
VRK2Q86Y07 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.71■□□□□ 0.91
VRK2Q86Y07 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRK2Q86Y07 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRK2Q86Y07 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRK2Q86Y07 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.71■□□□□ 0.91
VRK2Q86Y07 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRK2Q86Y07 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRK2Q86Y07 AL353803.4-201ENST00000565882 1934 ntBASIC20.7■□□□□ 0.91
VRK2Q86Y07 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VRK2Q86Y07 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VRK2Q86Y07 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VRK2Q86Y07 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.7■□□□□ 0.9
VRK2Q86Y07 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.7■□□□□ 0.9
VRK2Q86Y07 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VRK2Q86Y07 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.7■□□□□ 0.9
VRK2Q86Y07 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VRK2Q86Y07 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VRK2Q86Y07 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.69■□□□□ 0.9
VRK2Q86Y07 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.69■□□□□ 0.9
VRK2Q86Y07 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VRK2Q86Y07 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.69■□□□□ 0.9
VRK2Q86Y07 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VRK2Q86Y07 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.68■□□□□ 0.9
VRK2Q86Y07 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VRK2Q86Y07 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VRK2Q86Y07 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VRK2Q86Y07 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VRK2Q86Y07 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VRK2Q86Y07 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VRK2Q86Y07 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VRK2Q86Y07 MIR6722-201ENST00000617286 78 ntBASIC20.68■□□□□ 0.9
VRK2Q86Y07 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.68■□□□□ 0.9
VRK2Q86Y07 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VRK2Q86Y07 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VRK2Q86Y07 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VRK2Q86Y07 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.67■□□□□ 0.9
VRK2Q86Y07 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VRK2Q86Y07 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.67■□□□□ 0.9
VRK2Q86Y07 AL117328.2-201ENST00000624617 1940 ntBASIC20.66■□□□□ 0.9
VRK2Q86Y07 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRK2Q86Y07 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRK2Q86Y07 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
VRK2Q86Y07 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.66■□□□□ 0.9
VRK2Q86Y07 AC092028.1-203ENST00000608262 953 ntBASIC20.66■□□□□ 0.9
VRK2Q86Y07 AC005703.6-201ENST00000623265 1329 ntBASIC20.66■□□□□ 0.9
VRK2Q86Y07 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
VRK2Q86Y07 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.66■□□□□ 0.9
VRK2Q86Y07 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRK2Q86Y07 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
VRK2Q86Y07 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRK2Q86Y07 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VRK2Q86Y07 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRK2Q86Y07 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRK2Q86Y07 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
VRK2Q86Y07 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRK2Q86Y07 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
VRK2Q86Y07 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
VRK2Q86Y07 KRT125P-201ENST00000546827 989 ntBASIC20.65■□□□□ 0.9
VRK2Q86Y07 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
VRK2Q86Y07 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VRK2Q86Y07 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VRK2Q86Y07 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VRK2Q86Y07 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.64■□□□□ 0.89
VRK2Q86Y07 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.64■□□□□ 0.89
VRK2Q86Y07 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.64■□□□□ 0.89
VRK2Q86Y07 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VRK2Q86Y07 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.63■□□□□ 0.89
VRK2Q86Y07 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.63■□□□□ 0.89
VRK2Q86Y07 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
VRK2Q86Y07 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.63■□□□□ 0.89
VRK2Q86Y07 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VRK2Q86Y07 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 AC144652.1-201ENST00000609974 1624 ntBASIC20.63■□□□□ 0.89
VRK2Q86Y07 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VRK2Q86Y07 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VRK2Q86Y07 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VRK2Q86Y07 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.62■□□□□ 0.89
VRK2Q86Y07 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms