Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.8■■□□□ 1.56
SFR1Q86XK3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SFR1Q86XK3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.79■■□□□ 1.56
SFR1Q86XK3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.79■■□□□ 1.56
SFR1Q86XK3 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.79■■□□□ 1.56
SFR1Q86XK3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.79■■□□□ 1.56
SFR1Q86XK3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.79■■□□□ 1.56
SFR1Q86XK3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SFR1Q86XK3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
SFR1Q86XK3 AL353803.4-201ENST00000565882 1934 ntBASIC24.78■■□□□ 1.56
SFR1Q86XK3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SFR1Q86XK3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SFR1Q86XK3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SFR1Q86XK3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SFR1Q86XK3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 AL512631.2-201ENST00000604634 923 ntBASIC24.78■■□□□ 1.56
SFR1Q86XK3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.78■■□□□ 1.56
SFR1Q86XK3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.77■■□□□ 1.56
SFR1Q86XK3 C9orf163-202ENST00000624034 2573 ntBASIC24.77■■□□□ 1.56
SFR1Q86XK3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SFR1Q86XK3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SFR1Q86XK3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.77■■□□□ 1.56
SFR1Q86XK3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.77■■□□□ 1.56
SFR1Q86XK3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
SFR1Q86XK3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SFR1Q86XK3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SFR1Q86XK3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.76■■□□□ 1.55
SFR1Q86XK3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.76■■□□□ 1.55
SFR1Q86XK3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.76■■□□□ 1.55
SFR1Q86XK3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.76■■□□□ 1.55
SFR1Q86XK3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SFR1Q86XK3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SFR1Q86XK3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SFR1Q86XK3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.75■■□□□ 1.55
SFR1Q86XK3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SFR1Q86XK3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SFR1Q86XK3 AC131212.1-201ENST00000613771 668 ntBASIC24.74■■□□□ 1.55
SFR1Q86XK3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SFR1Q86XK3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SFR1Q86XK3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SFR1Q86XK3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SFR1Q86XK3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.73■■□□□ 1.55
SFR1Q86XK3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SFR1Q86XK3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SFR1Q86XK3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
SFR1Q86XK3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.73■■□□□ 1.55
SFR1Q86XK3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SFR1Q86XK3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SFR1Q86XK3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.72■■□□□ 1.55
SFR1Q86XK3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SFR1Q86XK3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
SFR1Q86XK3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SFR1Q86XK3 AC131281.2-201ENST00000520478 145 ntBASIC24.72■■□□□ 1.55
SFR1Q86XK3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
SFR1Q86XK3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SFR1Q86XK3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.72■■□□□ 1.55
SFR1Q86XK3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SFR1Q86XK3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.71■■□□□ 1.55
SFR1Q86XK3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SFR1Q86XK3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
SFR1Q86XK3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.71■■□□□ 1.55
SFR1Q86XK3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.71■■□□□ 1.55
SFR1Q86XK3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.71■■□□□ 1.55
SFR1Q86XK3 MIR4466-201ENST00000606121 54 ntBASIC24.71■■□□□ 1.55
SFR1Q86XK3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.71■■□□□ 1.55
SFR1Q86XK3 LINC01529-204ENST00000636474 1715 ntBASIC24.71■■□□□ 1.55
SFR1Q86XK3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SFR1Q86XK3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SFR1Q86XK3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SFR1Q86XK3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.7■■□□□ 1.55
SFR1Q86XK3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.7■■□□□ 1.55
SFR1Q86XK3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
SFR1Q86XK3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
SFR1Q86XK3 FP325331.1-202ENST00000623531 1380 ntBASIC24.7■■□□□ 1.55
SFR1Q86XK3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SFR1Q86XK3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SFR1Q86XK3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.69■■□□□ 1.54
SFR1Q86XK3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SFR1Q86XK3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.69■■□□□ 1.54
SFR1Q86XK3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.69■■□□□ 1.54
SFR1Q86XK3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 561.8 ms