Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 DCAF8-208ENST00000461888 2277 ntTSL 526.15■■□□□ 1.783e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-215ENST00000490368 876 ntTSL 323.71■■□□□ 1.393e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.163e-6■■■□□ 16.8
PABPN1Q86U42 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.043e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-213ENST00000477163 513 ntTSL 320.75■□□□□ 0.913e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-217ENST00000497354 738 ntTSL 518.83■□□□□ 0.63e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.453e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.043e-6■■■□□ 16.8
PABPN1Q86U42 LTBP3-205ENST00000526124 347 ntTSL 531.44■■■□□ 2.621e-8■■■□□ 16.8
PABPN1Q86U42 ABCC6-202ENST00000456970 4137 ntTSL 221.24■□□□□ 0.992e-6■■■□□ 16.8
PABPN1Q86U42 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.092e-9■■■□□ 16.8
PABPN1Q86U42 PRPF39-202ENST00000424478 3174 ntTSL 225.17■■□□□ 1.622e-9■■■□□ 16.8
PABPN1Q86U42 PRPF39-203ENST00000477626 3507 ntTSL 221.57■■□□□ 1.042e-9■■■□□ 16.8
PABPN1Q86U42 PRPF39-206ENST00000554429 2977 ntTSL 55.31□□□□□ -1.562e-9■■■□□ 16.8
PABPN1Q86U42 PRPF39-208ENST00000554785 2121 ntTSL 25.09□□□□□ -1.592e-9■■■□□ 16.8
PABPN1Q86U42 PRPF39-205ENST00000554081 3223 ntTSL 54.86□□□□□ -1.632e-9■■■□□ 16.8
PABPN1Q86U42 PRPF39-207ENST00000554439 2982 ntTSL 54.85□□□□□ -1.632e-9■■■□□ 16.8
PABPN1Q86U42 SLC38A5-211ENST00000615300 797 ntTSL 329.57■■■□□ 2.325e-7■■■□□ 16.8
PABPN1Q86U42 SORBS3-216ENST00000523348 680 ntTSL 225.93■■□□□ 1.741e-7■■■□□ 16.8
PABPN1Q86U42 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.321e-8■■■□□ 16.7
PABPN1Q86U42 DAPK3-205ENST00000595279 2058 ntTSL 235.49■■■■□ 3.271e-8■■■□□ 16.7
PABPN1Q86U42 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.161e-8■■■□□ 16.7
PABPN1Q86U42 SAFB2-205ENST00000590000 633 ntTSL 230.42■■■□□ 2.463e-7■■■□□ 16.7
PABPN1Q86U42 MED24-210ENST00000492176 776 ntTSL 224.04■■□□□ 1.442e-7■■■□□ 16.7
PABPN1Q86U42 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC6.69□□□□□ -1.341e-8■■■□□ 16.7
PABPN1Q86U42 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC36.09■■■■□ 3.375e-7■■■□□ 16.7
PABPN1Q86U42 INTS11-233ENST00000527098 2004 ntTSL 226.97■■□□□ 1.915e-7■■■□□ 16.7
PABPN1Q86U42 NCAPH2-210ENST00000523045 970 ntTSL 534.05■■■■□ 3.044e-7■■■□□ 16.7
PABPN1Q86U42 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC31.29■■■□□ 2.64e-7■■■□□ 16.7
PABPN1Q86U42 MYBBP1A-212ENST00000574934 1941 ntTSL 225.15■■□□□ 1.623e-8■■■□□ 16.7
PABPN1Q86U42 SAFB2-204ENST00000589925 506 ntTSL 333.55■■■□□ 2.969e-8■■■□□ 16.7
PABPN1Q86U42 ARHGEF1-222ENST00000600517 428 ntTSL 326.92■■□□□ 1.94e-7■■■□□ 16.7
PABPN1Q86U42 PSME2-215ENST00000560788 785 ntTSL 227.25■■□□□ 1.959e-10■■■□□ 16.7
PABPN1Q86U42 SPG7-213ENST00000566221 734 ntTSL 327.79■■■□□ 2.044e-8■■■□□ 16.7
PABPN1Q86U42 ARHGEF1-205ENST00000593609 576 ntTSL 235.45■■■■□ 3.272e-6■■■□□ 16.7
PABPN1Q86U42 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC39.92■■■■□ 3.986e-10■■■□□ 16.7
PABPN1Q86U42 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC37.63■■■■□ 3.616e-10■■■□□ 16.7
PABPN1Q86U42 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC33.32■■■□□ 2.926e-10■■■□□ 16.7
PABPN1Q86U42 DHRS2-208ENST00000556729 5318 ntTSL 223.72■■□□□ 1.396e-10■■■□□ 16.7
PABPN1Q86U42 DHRS2-207ENST00000556701 3157 ntTSL 1 (best)23.44■■□□□ 1.346e-10■■■□□ 16.7
PABPN1Q86U42 CDK5RAP3-211ENST00000578996 566 ntTSL 219.04■□□□□ 0.645e-10■■■□□ 16.7
PABPN1Q86U42 AL121845.3-203ENST00000496820 507 ntTSL 547.54■■■■■ 5.22e-15■■■□□ 16.7
PABPN1Q86U42 HMG20B-214ENST00000493191 852 ntTSL 347.53■■■■■ 5.23e-8■■■□□ 16.7
PABPN1Q86U42 HMG20B-207ENST00000461099 687 ntTSL 246.47■■■■■ 5.033e-8■■■□□ 16.7
PABPN1Q86U42 ACADVL-229ENST00000582356 633 ntTSL 445.68■■■■■ 4.93e-8■■■□□ 16.7
PABPN1Q86U42 ACADVL-210ENST00000578269 724 ntTSL 244■■■■■ 4.633e-8■■■□□ 16.7
PABPN1Q86U42 ACADVL-223ENST00000580263 545 ntTSL 243.98■■■■■ 4.633e-8■■■□□ 16.7
PABPN1Q86U42 ACADVL-212ENST00000578421 548 ntTSL 343.35■■■■■ 4.533e-8■■■□□ 16.7
PABPN1Q86U42 LIME1-207ENST00000489212 559 ntTSL 542.69■■■■■ 4.422e-15■■■□□ 16.7
PABPN1Q86U42 PLA2G4B-206ENST00000569354 264 ntTSL 236.18■■■■□ 3.383e-8■■■□□ 16.7
PABPN1Q86U42 VARS-216ENST00000428445 863 ntTSL 535.11■■■■□ 3.213e-8■■■□□ 16.7
PABPN1Q86U42 TUFM-203ENST00000565012 966 ntTSL 534.52■■■■□ 3.128e-12■■■□□ 16.7
PABPN1Q86U42 HMG20B-212ENST00000487894 1242 ntTSL 234■■■■□ 3.033e-8■■■□□ 16.7
PABPN1Q86U42 LIME1-208ENST00000493265 661 ntAPPRIS ALT2 TSL 233.62■■■□□ 2.972e-15■■■□□ 16.7
PABPN1Q86U42 MIR4721-201ENST00000577590 89 ntBASIC23.33■■□□□ 1.338e-12■■■□□ 16.7
PABPN1Q86U42 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.861e-6■■■□□ 16.7
PABPN1Q86U42 HSD17B4-208ENST00000507353 582 ntTSL 312.62□□□□□ -0.393e-8■■■□□ 16.7
PABPN1Q86U42 CS-232ENST00000552331 526 ntTSL 27.46□□□□□ -1.223e-8■■■□□ 16.7
PABPN1Q86U42 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.95e-7■■■□□ 16.7
PABPN1Q86U42 AP1G2-216ENST00000554982 716 ntTSL 424.67■■□□□ 1.545e-11■■■□□ 16.7
PABPN1Q86U42 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC46.1■■■■■ 4.978e-7■■■□□ 16.7
PABPN1Q86U42 GOLGA8B-210ENST00000569100 6488 ntTSL 514.7□□□□□ -0.062e-7■■■□□ 16.6
PABPN1Q86U42 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.132e-7■■■□□ 16.6
PABPN1Q86U42 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.352e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC39.47■■■■□ 3.914e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-204ENST00000415132 1645 ntTSL 537.06■■■■□ 3.524e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)34.2■■■■□ 3.074e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.424e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-216ENST00000495366 2386 ntTSL 224.73■■□□□ 1.554e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-203ENST00000413305 1874 ntTSL 1 (best)21.69■■□□□ 1.064e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-207ENST00000435138 2632 ntTSL 221.06■□□□□ 0.964e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.914e-7■■■□□ 16.6
PABPN1Q86U42 SSUH2-208ENST00000455157 3219 ntTSL 216.64■□□□□ 0.264e-7■■■□□ 16.6
PABPN1Q86U42 AP1G2-217ENST00000555118 362 ntTSL 523.24■■□□□ 1.315e-11■■■□□ 16.6
PABPN1Q86U42 LLGL2-206ENST00000577211 543 ntTSL 330.21■■■□□ 2.431e-7■■■□□ 16.6
PABPN1Q86U42 ARHGEF1-218ENST00000599589 2636 ntTSL 1 (best)30.06■■■□□ 2.49e-7■■■□□ 16.6
PABPN1Q86U42 ARHGEF1-213ENST00000595897 2973 ntTSL 1 (best)25.79■■□□□ 1.729e-7■■■□□ 16.6
PABPN1Q86U42 MED24-224ENST00000580720 549 ntTSL 330.38■■■□□ 2.453e-7■■■□□ 16.6
PABPN1Q86U42 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC19.9■□□□□ 0.787e-7■■■□□ 16.6
PABPN1Q86U42 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.657e-7■■■□□ 16.6
PABPN1Q86U42 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.027e-7■■■□□ 16.6
PABPN1Q86U42 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.087e-7■■■□□ 16.6
PABPN1Q86U42 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.097e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-229ENST00000585269 1346 ntTSL 543.6■■■■■ 4.579e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC34.29■■■■□ 3.089e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC33.64■■■□□ 2.989e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.759e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-205ENST00000471896 2129 ntTSL 230.5■■■□□ 2.479e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-227ENST00000584850 2442 ntTSL 227.5■■□□□ 1.999e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-208ENST00000488876 2404 ntTSL 225.89■■□□□ 1.739e-7■■■□□ 16.6
PABPN1Q86U42 STARD3-206ENST00000481171 3451 ntTSL 218.99■□□□□ 0.639e-7■■■□□ 16.6
PABPN1Q86U42 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.712e-6■■■□□ 16.6
PABPN1Q86U42 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.694e-7■■■□□ 16.6
PABPN1Q86U42 ARHGEF1-211ENST00000595723 872 ntTSL 531.96■■■□□ 2.714e-7■■■□□ 16.6
PABPN1Q86U42 NCAPH2-204ENST00000418794 640 ntTSL 528.4■■■□□ 2.142e-7■■■□□ 16.5
PABPN1Q86U42 CCDC14-207ENST00000433542 3260 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.342e-6■■■□□ 16.5
PABPN1Q86U42 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.292e-6■■■□□ 16.5
PABPN1Q86U42 CCDC14-201ENST00000310351 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.22e-6■■■□□ 16.5
PABPN1Q86U42 CCDC14-216ENST00000483247 697 ntTSL 313.39□□□□□ -0.272e-6■■■□□ 16.5
PABPN1Q86U42 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.983e-7■■■□□ 16.5
Retrieved 100 of 8,254 protein–RNA pairs in 241 ms