Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQA1Q5Y7H0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQA1Q5Y7H0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQA1Q5Y7H0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.92
HLA-DQA1Q5Y7H0 C17orf82-201ENST00000623772 1530 ntBASIC20.83■□□□□ 0.92
HLA-DQA1Q5Y7H0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 MIR4466-201ENST00000606121 54 ntBASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQA1Q5Y7H0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC092171.4-201ENST00000609130 632 ntBASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HLA-DQA1Q5Y7H0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC241377.3-202ENST00000626088 1088 ntBASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC241585.3-202ENST00000628937 1088 ntBASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC245100.8-202ENST00000629247 1058 ntBASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
HLA-DQA1Q5Y7H0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC144652.1-201ENST00000609974 1624 ntBASIC20.79■□□□□ 0.92
HLA-DQA1Q5Y7H0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 FP325331.1-202ENST00000623531 1380 ntBASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DQA1Q5Y7H0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA1Q5Y7H0 AC079630.1-202ENST00000618127 1840 ntBASIC20.77■□□□□ 0.92
HLA-DQA1Q5Y7H0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA1Q5Y7H0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DQA1Q5Y7H0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DQA1Q5Y7H0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 ANOS2P-203ENST00000472227 1816 ntBASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 AC099791.2-201ENST00000605725 427 ntBASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HLA-DQA1Q5Y7H0 LINC01529-204ENST00000636474 1715 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms