Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
CCSMST1Q4G0I0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCSMST1Q4G0I0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.83■■□□□ 1.09
CCSMST1Q4G0I0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CCSMST1Q4G0I0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.83■■□□□ 1.09
CCSMST1Q4G0I0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCSMST1Q4G0I0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCSMST1Q4G0I0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.83■■□□□ 1.08
CCSMST1Q4G0I0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.83■■□□□ 1.08
CCSMST1Q4G0I0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 C9orf163-202ENST00000624034 2573 ntBASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 AC144652.1-201ENST00000609974 1624 ntBASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.82■■□□□ 1.08
CCSMST1Q4G0I0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCSMST1Q4G0I0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 AL353803.4-201ENST00000565882 1934 ntBASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCSMST1Q4G0I0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 DUSP8P3-201ENST00000399571 1760 ntBASIC21.79■■□□□ 1.08
CCSMST1Q4G0I0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCSMST1Q4G0I0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.77■■□□□ 1.08
CCSMST1Q4G0I0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.77■■□□□ 1.07
CCSMST1Q4G0I0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCSMST1Q4G0I0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCSMST1Q4G0I0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCSMST1Q4G0I0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCSMST1Q4G0I0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCSMST1Q4G0I0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCSMST1Q4G0I0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCSMST1Q4G0I0 AC006455.2-201ENST00000429931 906 ntBASIC21.74■■□□□ 1.07
CCSMST1Q4G0I0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms