Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRFAM7AQ494W8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRFAM7AQ494W8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRFAM7AQ494W8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRFAM7AQ494W8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 ZNRF2P3-201ENST00000424200 374 ntBASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 AC104564.3-201ENST00000582367 638 ntBASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRFAM7AQ494W8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 PBX2P1-201ENST00000493219 1291 ntBASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRFAM7AQ494W8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRFAM7AQ494W8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 MIR5787-201ENST00000611784 55 ntBASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 AC106739.1-201ENST00000617035 715 ntBASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRFAM7AQ494W8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRFAM7AQ494W8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRFAM7AQ494W8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRFAM7AQ494W8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 AL512631.2-201ENST00000604634 923 ntBASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRFAM7AQ494W8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRFAM7AQ494W8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRFAM7AQ494W8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRFAM7AQ494W8 AC011551.1-201ENST00000614101 683 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms