Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.345e-7■□□□□ 10.9
TROVE2P10155 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.115e-7■□□□□ 10.9
TROVE2P10155 MMS19-211ENST00000441194 916 ntTSL 516.74■□□□□ 0.272e-9■□□□□ 10.9
TROVE2P10155 MMS19-210ENST00000439048 609 ntTSL 516.42■□□□□ 0.222e-9■□□□□ 10.9
TROVE2P10155 MMS19-205ENST00000422685 877 ntAPPRIS ALT2 TSL 516.25■□□□□ 0.192e-9■□□□□ 10.9
TROVE2P10155 MMS19-213ENST00000448660 776 ntTSL 516.25■□□□□ 0.192e-9■□□□□ 10.9
TROVE2P10155 MMS19-208ENST00000437002 933 ntAPPRIS ALT2 TSL 514.84□□□□□ -0.032e-9■□□□□ 10.9
TROVE2P10155 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.532e-9■□□□□ 10.9
TROVE2P10155 MMS19-204ENST00000415383 3401 ntTSL 1 (best)11.45□□□□□ -0.582e-9■□□□□ 10.9
TROVE2P10155 MMS19-209ENST00000438925 3797 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.592e-9■□□□□ 10.9
TROVE2P10155 MMS19-201ENST00000327238 3165 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.652e-9■□□□□ 10.9
TROVE2P10155 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.712e-9■□□□□ 10.9
TROVE2P10155 MMS19-214ENST00000477575 986 ntTSL 29.75□□□□□ -0.852e-9■□□□□ 10.9
TROVE2P10155 MMS19-217ENST00000483626 884 ntTSL 59.31□□□□□ -0.922e-9■□□□□ 10.9
TROVE2P10155 C7orf50-204ENST00000412051 1147 ntAPPRIS ALT2 TSL 217.4■□□□□ 0.383e-6■□□□□ 10.8
TROVE2P10155 C7orf50-206ENST00000465681 2621 ntTSL 1 (best)17.12■□□□□ 0.333e-6■□□□□ 10.8
TROVE2P10155 C7orf50-205ENST00000444428 507 ntAPPRIS ALT2 TSL 313.95□□□□□ -0.183e-6■□□□□ 10.8
TROVE2P10155 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 57.51□□□□□ -1.212e-17■□□□□ 10.8
TROVE2P10155 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.312e-17■□□□□ 10.8
TROVE2P10155 RPL7A-203ENST00000426651 1057 ntTSL 516.86■□□□□ 0.291e-323■□□□□ 10.8
TROVE2P10155 RPL7A-209ENST00000496554 947 ntTSL 215.59■□□□□ 0.091e-323■□□□□ 10.8
TROVE2P10155 RPL7A-206ENST00000485706 743 ntTSL 212.43□□□□□ -0.421e-323■□□□□ 10.8
TROVE2P10155 RPL7A-205ENST00000468019 941 ntTSL 211.83□□□□□ -0.521e-323■□□□□ 10.8
TROVE2P10155 RPL7A-207ENST00000489392 966 ntTSL 59.32□□□□□ -0.921e-323■□□□□ 10.8
TROVE2P10155 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.83□□□□□ -11e-323■□□□□ 10.8
TROVE2P10155 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.421e-323■□□□□ 10.8
TROVE2P10155 RPL7A-204ENST00000463740 1164 ntTSL 55.4□□□□□ -1.541e-323■□□□□ 10.8
TROVE2P10155 SNORD24-201ENST00000383884 75 ntBASIC-0.08□□□□□ -2.421e-323■□□□□ 10.8
TROVE2P10155 SNORA78-201ENST00000459373 127 ntBASIC16.46■□□□□ 0.231e-15■□□□□ 10.8
TROVE2P10155 SNHG9-202ENST00000564014 471 ntBASIC14□□□□□ -0.171e-15■□□□□ 10.8
TROVE2P10155 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.72□□□□□ -0.371e-15■□□□□ 10.8
TROVE2P10155 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC11.82□□□□□ -0.521e-15■□□□□ 10.8
TROVE2P10155 DUXAP9-203ENST00000610585 903 ntTSL 39.54□□□□□ -0.881e-15■□□□□ 10.8
TROVE2P10155 DUXAP9-205ENST00000619938 642 ntTSL 1 (best)9.29□□□□□ -0.921e-15■□□□□ 10.8
TROVE2P10155 DUXAP9-207ENST00000621361 2397 ntTSL 1 (best)6.42□□□□□ -1.381e-15■□□□□ 10.8
TROVE2P10155 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.034e-6■□□□□ 10.8
TROVE2P10155 DAZAP1-206ENST00000587833 560 ntTSL 59.77□□□□□ -0.853e-12■□□□□ 10.8
TROVE2P10155 SLC2A1-202ENST00000415851 578 ntTSL 217.67■□□□□ 0.423e-6■□□□□ 10.7
TROVE2P10155 SLC2A1-201ENST00000372500 533 ntTSL 313.56□□□□□ -0.243e-6■□□□□ 10.7
TROVE2P10155 ATP6V0A1-207ENST00000585828 2139 ntTSL 1 (best)15.88■□□□□ 0.135e-6■□□□□ 10.7
TROVE2P10155 ATP6V0A1-209ENST00000586201 881 ntTSL 311.81□□□□□ -0.525e-6■□□□□ 10.7
TROVE2P10155 ATP6V0A1-217ENST00000588138 573 ntTSL 511.51□□□□□ -0.575e-6■□□□□ 10.7
TROVE2P10155 ATP6V0A1-213ENST00000587510 564 ntTSL 46.12□□□□□ -1.435e-6■□□□□ 10.7
TROVE2P10155 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC13.71□□□□□ -0.212e-13■□□□□ 10.7
TROVE2P10155 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.342e-13■□□□□ 10.7
TROVE2P10155 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -12e-13■□□□□ 10.7
TROVE2P10155 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.41□□□□□ -1.222e-13■□□□□ 10.7
TROVE2P10155 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.614e-6■□□□□ 10.7
TROVE2P10155 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.494e-6■□□□□ 10.7
TROVE2P10155 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.95■□□□□ 0.464e-6■□□□□ 10.7
TROVE2P10155 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.291e-8■□□□□ 10.7
TROVE2P10155 FADS2-213ENST00000523235 5073 ntTSL 215.93■□□□□ 0.141e-8■□□□□ 10.7
TROVE2P10155 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.81■□□□□ 0.121e-8■□□□□ 10.7
TROVE2P10155 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.64■■□□□ 1.372e-7■□□□□ 10.7
TROVE2P10155 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.822e-7■□□□□ 10.7
TROVE2P10155 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.03■□□□□ 0.642e-7■□□□□ 10.7
TROVE2P10155 WIPI2-207ENST00000471851 2523 ntTSL 214.45□□□□□ -0.12e-7■□□□□ 10.7
TROVE2P10155 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.23□□□□□ -0.131e-88■□□□□ 10.7
TROVE2P10155 SNHG22-202ENST00000615535 421 nt12.17□□□□□ -0.461e-88■□□□□ 10.7
TROVE2P10155 HNRNPU-217ENST00000638952 5678 ntTSL 519■□□□□ 0.636e-9■□□□□ 10.6
TROVE2P10155 ASPSCR1-203ENST00000344865 1041 ntTSL 218.79■□□□□ 0.66e-9■□□□□ 10.6
TROVE2P10155 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.26■□□□□ 0.516e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.486e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-209ENST00000476241 4844 ntTSL 517.62■□□□□ 0.416e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-228ENST00000640306 2917 ntTSL 517.34■□□□□ 0.376e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.176e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.166e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-214ENST00000638475 2698 ntTSL 515.71■□□□□ 0.116e-9■□□□□ 10.6
TROVE2P10155 ASPSCR1-209ENST00000581484 1001 ntTSL 214.9□□□□□ -0.026e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-229ENST00000640440 871 ntTSL 312.55□□□□□ -0.46e-9■□□□□ 10.6
TROVE2P10155 HNRNPU-224ENST00000640056 2045 ntTSL 510.52□□□□□ -0.736e-9■□□□□ 10.6
TROVE2P10155 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.6■□□□□ 0.093e-7■□□□□ 10.6
TROVE2P10155 SLC2A1-209ENST00000630821 591 ntTSL 212□□□□□ -0.493e-7■□□□□ 10.6
TROVE2P10155 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.373e-17■□□□□ 10.6
TROVE2P10155 SEPT5-212ENST00000470814 2353 ntTSL 520.28■□□□□ 0.843e-17■□□□□ 10.6
TROVE2P10155 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)17.03■□□□□ 0.323e-17■□□□□ 10.6
TROVE2P10155 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)15.57■□□□□ 0.083e-17■□□□□ 10.6
TROVE2P10155 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.344e-8■□□□□ 10.6
TROVE2P10155 XPO1-206ENST00000428210 6776 ntTSL 214.45□□□□□ -0.14e-8■□□□□ 10.6
TROVE2P10155 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.034e-8■□□□□ 10.6
TROVE2P10155 XPO1-207ENST00000436018 318 ntTSL 43.66□□□□□ -1.824e-8■□□□□ 10.6
TROVE2P10155 XPO1-209ENST00000443240 565 ntTSL 42.89□□□□□ -1.954e-8■□□□□ 10.6
TROVE2P10155 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.955e-7■□□□□ 10.5
TROVE2P10155 EXOC3L4-207ENST00000560925 2341 ntTSL 224.76■■□□□ 1.555e-7■□□□□ 10.5
TROVE2P10155 EXOC3L4-206ENST00000560304 657 ntTSL 320.07■□□□□ 0.85e-7■□□□□ 10.5
TROVE2P10155 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.755e-7■□□□□ 10.5
TROVE2P10155 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.565e-7■□□□□ 10.5
TROVE2P10155 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.52■□□□□ 0.565e-7■□□□□ 10.5
TROVE2P10155 MAD1L1-213ENST00000455998 557 ntTSL 418.17■□□□□ 0.55e-7■□□□□ 10.5
TROVE2P10155 RER1-201ENST00000306256 695 ntTSL 517.45■□□□□ 0.385e-7■□□□□ 10.5
TROVE2P10155 SQSTM1-204ENST00000453046 572 ntTSL 416.99■□□□□ 0.315e-7■□□□□ 10.5
TROVE2P10155 SQSTM1-209ENST00000504627 602 ntTSL 516.99■□□□□ 0.315e-7■□□□□ 10.5
TROVE2P10155 SQSTM1-212ENST00000508284 578 ntTSL 416.99■□□□□ 0.315e-7■□□□□ 10.5
TROVE2P10155 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.59■□□□□ 0.255e-7■□□□□ 10.5
TROVE2P10155 EXOC3L4-204ENST00000559693 813 ntTSL 316.59■□□□□ 0.255e-7■□□□□ 10.5
TROVE2P10155 MAD1L1-211ENST00000445959 831 ntTSL 316.54■□□□□ 0.245e-7■□□□□ 10.5
TROVE2P10155 SQSTM1-215ENST00000514093 842 ntTSL 516.51■□□□□ 0.235e-7■□□□□ 10.5
TROVE2P10155 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.215e-7■□□□□ 10.5
TROVE2P10155 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.01■□□□□ 0.155e-7■□□□□ 10.5
TROVE2P10155 EXOC3L4-203ENST00000559661 665 ntTSL 515.76■□□□□ 0.115e-7■□□□□ 10.5
Retrieved 100 of 4,203 protein–RNA pairs in 127.1 ms