RNA–Protein interactions for RNA: ENST00000587510.5

ATP6V0A1-213, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 4

Gene ATP6V0A1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-213ENST00000587510 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
ATP6V0A1-213ENST00000587510 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
ATP6V0A1-213ENST00000587510 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
ATP6V0A1-213ENST00000587510 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
ATP6V0A1-213ENST00000587510 FOXD1Q16676 465 aa18.09■□□□□ 0.49
ATP6V0A1-213ENST00000587510 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
ATP6V0A1-213ENST00000587510 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
ATP6V0A1-213ENST00000587510 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
ATP6V0A1-213ENST00000587510 ADRA2BP18089 450 aa17.05■□□□□ 0.32
ATP6V0A1-213ENST00000587510 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
ATP6V0A1-213ENST00000587510 MSH5O43196 834 aa16.76■□□□□ 0.27
ATP6V0A1-213ENST00000587510 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
ATP6V0A1-213ENST00000587510 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
ATP6V0A1-213ENST00000587510 ABCC9O60706 1549 aa15.98■□□□□ 0.15
ATP6V0A1-213ENST00000587510 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
ATP6V0A1-213ENST00000587510 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
ATP6V0A1-213ENST00000587510 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
ATP6V0A1-213ENST00000587510 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
ATP6V0A1-213ENST00000587510 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
ATP6V0A1-213ENST00000587510 NACADO15069 1562 aa15.15■□□□□ 0.02
ATP6V0A1-213ENST00000587510 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
ATP6V0A1-213ENST00000587510 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
ATP6V0A1-213ENST00000587510 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
ATP6V0A1-213ENST00000587510 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
ATP6V0A1-213ENST00000587510 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
ATP6V0A1-213ENST00000587510 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
ATP6V0A1-213ENST00000587510 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
ATP6V0A1-213ENST00000587510 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
ATP6V0A1-213ENST00000587510 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
ATP6V0A1-213ENST00000587510 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
ATP6V0A1-213ENST00000587510 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
ATP6V0A1-213ENST00000587510 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
ATP6V0A1-213ENST00000587510 NPM3O75607 178 aaKnown RBP14.73□□□□□ -0.05
ATP6V0A1-213ENST00000587510 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
ATP6V0A1-213ENST00000587510 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
ATP6V0A1-213ENST00000587510 KCNA4P22459 653 aa14.66□□□□□ -0.06
ATP6V0A1-213ENST00000587510 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
ATP6V0A1-213ENST00000587510 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
ATP6V0A1-213ENST00000587510 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
ATP6V0A1-213ENST00000587510 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
ATP6V0A1-213ENST00000587510 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
ATP6V0A1-213ENST00000587510 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
ATP6V0A1-213ENST00000587510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■□ 21
ATP6V0A1-213ENST00000587510 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
ATP6V0A1-213ENST00000587510 DNAJC5Q9H3Z4 198 aa14.1□□□□□ -0.15
ATP6V0A1-213ENST00000587510 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
ATP6V0A1-213ENST00000587510 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
ATP6V0A1-213ENST00000587510 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
ATP6V0A1-213ENST00000587510 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
ATP6V0A1-213ENST00000587510 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
ATP6V0A1-213ENST00000587510 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
ATP6V0A1-213ENST00000587510 HMGXB3Q12766 1538 aa13.93□□□□□ -0.18
ATP6V0A1-213ENST00000587510 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
ATP6V0A1-213ENST00000587510 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
ATP6V0A1-213ENST00000587510 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
ATP6V0A1-213ENST00000587510 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.2
ATP6V0A1-213ENST00000587510 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
ATP6V0A1-213ENST00000587510 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
ATP6V0A1-213ENST00000587510 NESP48681 1621 aa13.75□□□□□ -0.21
ATP6V0A1-213ENST00000587510 SPINK5Q9NQ38 1064 aaPredicted RBP13.73□□□□□ -0.21
ATP6V0A1-213ENST00000587510 CUX2O14529 1486 aa13.73□□□□□ -0.21
ATP6V0A1-213ENST00000587510 WIZO95785 1651 aa13.69□□□□□ -0.22
ATP6V0A1-213ENST00000587510 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
ATP6V0A1-213ENST00000587510 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
ATP6V0A1-213ENST00000587510 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
ATP6V0A1-213ENST00000587510 CAPN15O75808 1086 aa13.61□□□□□ -0.23
ATP6V0A1-213ENST00000587510 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
ATP6V0A1-213ENST00000587510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
ATP6V0A1-213ENST00000587510 DSG3P32926 999 aa13.55□□□□□ -0.24
ATP6V0A1-213ENST00000587510 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
ATP6V0A1-213ENST00000587510 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
ATP6V0A1-213ENST00000587510 ZBTB22O15209 634 aa13.54□□□□□ -0.24
ATP6V0A1-213ENST00000587510 RSF1Q96T23 1441 aaPredicted RBP13.54□□□□□ -0.24
ATP6V0A1-213ENST00000587510 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
ATP6V0A1-213ENST00000587510 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
ATP6V0A1-213ENST00000587510 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
ATP6V0A1-213ENST00000587510 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
ATP6V0A1-213ENST00000587510 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
ATP6V0A1-213ENST00000587510 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
ATP6V0A1-213ENST00000587510 APLP2Q06481 763 aa13.46□□□□□ -0.25
ATP6V0A1-213ENST00000587510 WDR62O43379 1518 aa13.45□□□□□ -0.26
ATP6V0A1-213ENST00000587510 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
ATP6V0A1-213ENST00000587510 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
ATP6V0A1-213ENST00000587510 CFTRP13569 1480 aa13.42□□□□□ -0.26
ATP6V0A1-213ENST00000587510 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
ATP6V0A1-213ENST00000587510 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
ATP6V0A1-213ENST00000587510 ABCB7O75027 752 aa13.37□□□□□ -0.27
ATP6V0A1-213ENST00000587510 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
ATP6V0A1-213ENST00000587510 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
ATP6V0A1-213ENST00000587510 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
ATP6V0A1-213ENST00000587510 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
ATP6V0A1-213ENST00000587510 POLA2Q14181 598 aa13.17□□□□□ -0.3
ATP6V0A1-213ENST00000587510 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
ATP6V0A1-213ENST00000587510 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
ATP6V0A1-213ENST00000587510 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
ATP6V0A1-213ENST00000587510 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
ATP6V0A1-213ENST00000587510 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
ATP6V0A1-213ENST00000587510 ATXN8OSP0DMR3 200 aa13.09□□□□□ -0.31
ATP6V0A1-213ENST00000587510 TARBP1Q13395 1621 aaKnown RBP13.08□□□□□ -0.32
ATP6V0A1-213ENST00000587510 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms