Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDGFAP04085 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.87■□□□□ 0.93
PDGFAP04085 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.87■□□□□ 0.93
PDGFAP04085 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDGFAP04085 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.87■□□□□ 0.93
PDGFAP04085 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.87■□□□□ 0.93
PDGFAP04085 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.87■□□□□ 0.93
PDGFAP04085 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.87■□□□□ 0.93
PDGFAP04085 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDGFAP04085 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDGFAP04085 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDGFAP04085 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.87■□□□□ 0.93
PDGFAP04085 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.87■□□□□ 0.93
PDGFAP04085 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.87■□□□□ 0.93
PDGFAP04085 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.87■□□□□ 0.93
PDGFAP04085 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDGFAP04085 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.87■□□□□ 0.93
PDGFAP04085 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.86■□□□□ 0.93
PDGFAP04085 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 AC034268.1-201ENST00000441047 882 ntBASIC20.86■□□□□ 0.93
PDGFAP04085 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.86■□□□□ 0.93
PDGFAP04085 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.86■□□□□ 0.93
PDGFAP04085 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDGFAP04085 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.86■□□□□ 0.93
PDGFAP04085 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDGFAP04085 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDGFAP04085 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.85■□□□□ 0.93
PDGFAP04085 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PDGFAP04085 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDGFAP04085 KRT18P5-201ENST00000436075 1291 ntBASIC20.85■□□□□ 0.93
PDGFAP04085 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.85■□□□□ 0.93
PDGFAP04085 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PDGFAP04085 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.85■□□□□ 0.93
PDGFAP04085 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDGFAP04085 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PDGFAP04085 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDGFAP04085 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDGFAP04085 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.84■□□□□ 0.93
PDGFAP04085 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.84■□□□□ 0.93
PDGFAP04085 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDGFAP04085 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.84■□□□□ 0.93
PDGFAP04085 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PDGFAP04085 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDGFAP04085 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PDGFAP04085 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDGFAP04085 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFAP04085 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
PDGFAP04085 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PDGFAP04085 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.83■□□□□ 0.93
PDGFAP04085 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.83■□□□□ 0.93
PDGFAP04085 AC092437.1-201ENST00000624794 1048 ntBASIC20.83■□□□□ 0.93
PDGFAP04085 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.83■□□□□ 0.93
PDGFAP04085 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PDGFAP04085 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDGFAP04085 AC145676.1-201ENST00000514988 2004 ntBASIC20.83■□□□□ 0.92
PDGFAP04085 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PDGFAP04085 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.83■□□□□ 0.92
PDGFAP04085 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFAP04085 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFAP04085 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDGFAP04085 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.82■□□□□ 0.92
PDGFAP04085 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDGFAP04085 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.82■□□□□ 0.92
PDGFAP04085 YBX1P1-201ENST00000445822 960 ntBASIC20.82■□□□□ 0.92
PDGFAP04085 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.82■□□□□ 0.92
PDGFAP04085 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.82■□□□□ 0.92
PDGFAP04085 AC126544.1-201ENST00000580842 1059 ntBASIC20.82■□□□□ 0.92
PDGFAP04085 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
PDGFAP04085 pRNA.6-201ENST00000610482 90 ntBASIC20.82■□□□□ 0.92
PDGFAP04085 pRNA.5-201ENST00000612139 90 ntBASIC20.82■□□□□ 0.92
PDGFAP04085 pRNA.11-201ENST00000618423 90 ntBASIC20.82■□□□□ 0.92
PDGFAP04085 pRNA.13-201ENST00000619112 90 ntBASIC20.82■□□□□ 0.92
PDGFAP04085 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.82■□□□□ 0.92
PDGFAP04085 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDGFAP04085 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L2-201ENST00000561772 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L6-201ENST00000626483 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L1-201ENST00000627662 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L8-201ENST00000629013 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L3-201ENST00000630187 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L7-201ENST00000630678 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 DUX4L5-201ENST00000630834 1275 ntBASIC20.81■□□□□ 0.92
PDGFAP04085 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.81■□□□□ 0.92
PDGFAP04085 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDGFAP04085 TSPY26P-201ENST00000476365 1326 ntBASIC20.8■□□□□ 0.92
PDGFAP04085 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms