Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT33AO76009 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
KRT33AO76009 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT33AO76009 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT33AO76009 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT33AO76009 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT33AO76009 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
KRT33AO76009 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT33AO76009 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT33AO76009 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT33AO76009 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KRT33AO76009 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT33AO76009 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT33AO76009 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT33AO76009 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT33AO76009 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.18■□□□□ 0.82
KRT33AO76009 AC005703.6-201ENST00000623265 1329 ntBASIC20.18■□□□□ 0.82
KRT33AO76009 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KRT33AO76009 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT33AO76009 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT33AO76009 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT33AO76009 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KRT33AO76009 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT33AO76009 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 AL356441.2-201ENST00000443009 864 ntBASIC20.17■□□□□ 0.82
KRT33AO76009 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KRT33AO76009 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT33AO76009 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT33AO76009 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT33AO76009 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT33AO76009 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT33AO76009 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT33AO76009 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT33AO76009 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
KRT33AO76009 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT33AO76009 MIR6724-1-201ENST00000616420 92 ntBASIC20.16■□□□□ 0.82
KRT33AO76009 MIR6724-2-201ENST00000616483 92 ntBASIC20.16■□□□□ 0.82
KRT33AO76009 MIR6724-4-201ENST00000617390 92 ntBASIC20.16■□□□□ 0.82
KRT33AO76009 MIR6724-3-201ENST00000622482 92 ntBASIC20.16■□□□□ 0.82
KRT33AO76009 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KRT33AO76009 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT33AO76009 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT33AO76009 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRT33AO76009 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
KRT33AO76009 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT33AO76009 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT33AO76009 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT33AO76009 ABCB10P4-201ENST00000566803 2184 ntBASIC20.15■□□□□ 0.82
KRT33AO76009 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT33AO76009 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT33AO76009 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.15■□□□□ 0.82
KRT33AO76009 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT33AO76009 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KRT33AO76009 C9orf163-202ENST00000624034 2573 ntBASIC20.15■□□□□ 0.82
KRT33AO76009 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
KRT33AO76009 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KRT33AO76009 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT33AO76009 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT33AO76009 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT33AO76009 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT33AO76009 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT33AO76009 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT33AO76009 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT33AO76009 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT33AO76009 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT33AO76009 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
KRT33AO76009 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT33AO76009 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT33AO76009 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT33AO76009 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT33AO76009 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms