Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF40O75150 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF40O75150 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF40O75150 MIR4466-201ENST00000606121 54 ntBASIC24.01■■□□□ 1.43
RNF40O75150 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF40O75150 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF40O75150 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF40O75150 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RNF40O75150 AC096631.2-201ENST00000436136 790 ntBASIC24■■□□□ 1.43
RNF40O75150 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24■■□□□ 1.43
RNF40O75150 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24■■□□□ 1.43
RNF40O75150 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24■■□□□ 1.43
RNF40O75150 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF40O75150 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24■■□□□ 1.43
RNF40O75150 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF40O75150 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF40O75150 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF40O75150 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RNF40O75150 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF40O75150 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 AF131216.4-201ENST00000638924 1588 ntBASIC23.99■■□□□ 1.43
RNF40O75150 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF40O75150 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF40O75150 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF40O75150 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF40O75150 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF40O75150 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF40O75150 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF40O75150 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF40O75150 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
RNF40O75150 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF40O75150 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF40O75150 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF40O75150 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF40O75150 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF40O75150 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF40O75150 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.97■■□□□ 1.43
RNF40O75150 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
RNF40O75150 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
RNF40O75150 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF40O75150 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.96■■□□□ 1.43
RNF40O75150 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.96■■□□□ 1.43
RNF40O75150 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.96■■□□□ 1.43
RNF40O75150 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF40O75150 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RNF40O75150 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF40O75150 AL512631.2-201ENST00000604634 923 ntBASIC23.95■■□□□ 1.42
RNF40O75150 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RNF40O75150 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF40O75150 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF40O75150 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RNF40O75150 FOXO3B-201ENST00000395675 1928 ntBASIC23.94■■□□□ 1.42
RNF40O75150 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF40O75150 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF40O75150 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF40O75150 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF40O75150 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF40O75150 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF40O75150 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF40O75150 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.93■■□□□ 1.42
RNF40O75150 AC005837.3-201ENST00000612163 286 ntBASIC23.93■■□□□ 1.42
RNF40O75150 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF40O75150 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF40O75150 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF40O75150 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RNF40O75150 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF40O75150 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RNF40O75150 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF40O75150 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF40O75150 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF40O75150 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF40O75150 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.92■■□□□ 1.42
RNF40O75150 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF40O75150 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF40O75150 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF40O75150 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF40O75150 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF40O75150 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF40O75150 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF40O75150 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF40O75150 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF40O75150 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF40O75150 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF40O75150 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms