Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 IRS3P-201ENST00000223076 1006 ntBASIC22.53■■□□□ 1.2
MID1O15344 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MID1O15344 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.53■■□□□ 1.2
MID1O15344 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.53■■□□□ 1.2
MID1O15344 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MID1O15344 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MID1O15344 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MID1O15344 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.53■■□□□ 1.2
MID1O15344 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MID1O15344 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MID1O15344 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MID1O15344 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MID1O15344 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
MID1O15344 SLC47A1P1-202ENST00000449666 945 ntBASIC22.52■■□□□ 1.2
MID1O15344 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.52■■□□□ 1.2
MID1O15344 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.52■■□□□ 1.2
MID1O15344 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MID1O15344 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
MID1O15344 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MID1O15344 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.51■■□□□ 1.19
MID1O15344 AC126544.1-201ENST00000580842 1059 ntBASIC22.51■■□□□ 1.19
MID1O15344 LINC00543-201ENST00000567234 1845 ntBASIC22.51■■□□□ 1.19
MID1O15344 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MID1O15344 AC133637.1-201ENST00000624115 1537 ntBASIC22.51■■□□□ 1.19
MID1O15344 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MID1O15344 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
MID1O15344 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MID1O15344 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MID1O15344 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MID1O15344 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
MID1O15344 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.5■■□□□ 1.19
MID1O15344 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.5■■□□□ 1.19
MID1O15344 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MID1O15344 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MID1O15344 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MID1O15344 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
MID1O15344 MIR5787-201ENST00000611784 55 ntBASIC22.49■■□□□ 1.19
MID1O15344 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
MID1O15344 FP325331.1-202ENST00000623531 1380 ntBASIC22.49■■□□□ 1.19
MID1O15344 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
MID1O15344 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 AL139125.2-201ENST00000623134 1869 ntBASIC22.48■■□□□ 1.19
MID1O15344 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.48■■□□□ 1.19
MID1O15344 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 AL499627.2-201ENST00000606283 725 ntBASIC22.48■■□□□ 1.19
MID1O15344 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.48■■□□□ 1.19
MID1O15344 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MID1O15344 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 AC144652.1-201ENST00000609974 1624 ntBASIC22.47■■□□□ 1.19
MID1O15344 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.47■■□□□ 1.19
MID1O15344 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.47■■□□□ 1.19
MID1O15344 DUX4L4-201ENST00000566884 1269 ntBASIC22.47■■□□□ 1.19
MID1O15344 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.47■■□□□ 1.19
MID1O15344 MIR6821-201ENST00000617625 74 ntBASIC22.47■■□□□ 1.19
MID1O15344 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
MID1O15344 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MID1O15344 AC004812.2-201ENST00000611079 2094 ntBASIC22.46■■□□□ 1.19
MID1O15344 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
MID1O15344 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MID1O15344 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
MID1O15344 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.46■■□□□ 1.19
MID1O15344 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MID1O15344 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.46■■□□□ 1.19
MID1O15344 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.46■■□□□ 1.19
MID1O15344 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
MID1O15344 AC097381.1-201ENST00000429019 1296 ntBASIC22.46■■□□□ 1.19
MID1O15344 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.46■■□□□ 1.19
MID1O15344 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.46■■□□□ 1.19
MID1O15344 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
MID1O15344 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
MID1O15344 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MID1O15344 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.46■■□□□ 1.19
MID1O15344 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.45■■□□□ 1.19
MID1O15344 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MID1O15344 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
MID1O15344 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MID1O15344 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.45■■□□□ 1.18
MID1O15344 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
MID1O15344 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.45■■□□□ 1.18
MID1O15344 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
MID1O15344 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms