Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPB1O00241 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.9■□□□□ 0.62
SIRPB1O00241 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPB1O00241 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.9■□□□□ 0.62
SIRPB1O00241 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPB1O00241 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.89■□□□□ 0.61
SIRPB1O00241 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.89■□□□□ 0.61
SIRPB1O00241 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SIRPB1O00241 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SIRPB1O00241 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SIRPB1O00241 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPB1O00241 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
SIRPB1O00241 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SIRPB1O00241 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SIRPB1O00241 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.88■□□□□ 0.61
SIRPB1O00241 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.88■□□□□ 0.61
SIRPB1O00241 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.88■□□□□ 0.61
SIRPB1O00241 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.88■□□□□ 0.61
SIRPB1O00241 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPB1O00241 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPB1O00241 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SIRPB1O00241 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPB1O00241 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SIRPB1O00241 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPB1O00241 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.87■□□□□ 0.61
SIRPB1O00241 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPB1O00241 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SIRPB1O00241 AC239859.2-201ENST00000444165 318 ntBASIC18.87■□□□□ 0.61
SIRPB1O00241 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.87■□□□□ 0.61
SIRPB1O00241 AC009299.2-201ENST00000482477 511 ntBASIC18.87■□□□□ 0.61
SIRPB1O00241 AL451085.2-201ENST00000605085 799 ntBASIC18.87■□□□□ 0.61
SIRPB1O00241 MIR4787-201ENST00000607364 84 ntBASIC18.87■□□□□ 0.61
SIRPB1O00241 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.87■□□□□ 0.61
SIRPB1O00241 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SIRPB1O00241 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SIRPB1O00241 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.86■□□□□ 0.61
SIRPB1O00241 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SIRPB1O00241 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 AC005703.6-201ENST00000623265 1329 ntBASIC18.86■□□□□ 0.61
SIRPB1O00241 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SIRPB1O00241 Z92544.1-202ENST00000571933 1220 ntBASIC18.86■□□□□ 0.61
SIRPB1O00241 AC092028.1-203ENST00000608262 953 ntBASIC18.86■□□□□ 0.61
SIRPB1O00241 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.86■□□□□ 0.61
SIRPB1O00241 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SIRPB1O00241 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SIRPB1O00241 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPB1O00241 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.85■□□□□ 0.61
SIRPB1O00241 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.85■□□□□ 0.61
SIRPB1O00241 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SIRPB1O00241 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.85■□□□□ 0.61
SIRPB1O00241 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPB1O00241 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
SIRPB1O00241 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SIRPB1O00241 MIR6722-201ENST00000617286 78 ntBASIC18.85■□□□□ 0.61
SIRPB1O00241 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPB1O00241 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.85■□□□□ 0.61
SIRPB1O00241 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPB1O00241 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPB1O00241 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.84■□□□□ 0.61
SIRPB1O00241 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.84■□□□□ 0.61
SIRPB1O00241 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPB1O00241 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.84■□□□□ 0.61
SIRPB1O00241 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPB1O00241 TSPY9P-201ENST00000440215 945 ntBASIC18.84■□□□□ 0.61
SIRPB1O00241 TSPY11P-201ENST00000442607 1045 ntBASIC18.84■□□□□ 0.61
SIRPB1O00241 MTDHP2-201ENST00000601468 714 ntBASIC18.84■□□□□ 0.61
SIRPB1O00241 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPB1O00241 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.84■□□□□ 0.61
SIRPB1O00241 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.84■□□□□ 0.61
SIRPB1O00241 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.83■□□□□ 0.61
SIRPB1O00241 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.83■□□□□ 0.6
SIRPB1O00241 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.83■□□□□ 0.6
SIRPB1O00241 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SIRPB1O00241 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SIRPB1O00241 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPB1O00241 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPB1O00241 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPB1O00241 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms