Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SRRM4A7MD48 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SRRM4A7MD48 MIR6722-201ENST00000617286 78 ntBASIC18.05■□□□□ 0.48
SRRM4A7MD48 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.05■□□□□ 0.48
SRRM4A7MD48 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRRM4A7MD48 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 AL353803.4-201ENST00000565882 1934 ntBASIC18.04■□□□□ 0.48
SRRM4A7MD48 AC233723.2-201ENST00000623798 2106 ntBASIC18.04■□□□□ 0.48
SRRM4A7MD48 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM4A7MD48 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM4A7MD48 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM4A7MD48 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.04■□□□□ 0.48
SRRM4A7MD48 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRRM4A7MD48 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SRRM4A7MD48 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRRM4A7MD48 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.03■□□□□ 0.48
SRRM4A7MD48 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SRRM4A7MD48 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.03■□□□□ 0.48
SRRM4A7MD48 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRRM4A7MD48 AC092028.1-203ENST00000608262 953 ntBASIC18.03■□□□□ 0.48
SRRM4A7MD48 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
SRRM4A7MD48 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRRM4A7MD48 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRRM4A7MD48 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.03■□□□□ 0.48
SRRM4A7MD48 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRRM4A7MD48 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRRM4A7MD48 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRRM4A7MD48 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRRM4A7MD48 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.02■□□□□ 0.48
SRRM4A7MD48 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.02■□□□□ 0.48
SRRM4A7MD48 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRRM4A7MD48 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRRM4A7MD48 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRRM4A7MD48 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRRM4A7MD48 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 Z92544.1-202ENST00000571933 1220 ntBASIC18.01■□□□□ 0.47
SRRM4A7MD48 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.01■□□□□ 0.47
SRRM4A7MD48 AC005703.6-201ENST00000623265 1329 ntBASIC18■□□□□ 0.47
SRRM4A7MD48 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRRM4A7MD48 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SRRM4A7MD48 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SRRM4A7MD48 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18■□□□□ 0.47
SRRM4A7MD48 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18■□□□□ 0.47
SRRM4A7MD48 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18■□□□□ 0.47
SRRM4A7MD48 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SRRM4A7MD48 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRRM4A7MD48 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SRRM4A7MD48 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18■□□□□ 0.47
SRRM4A7MD48 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SRRM4A7MD48 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
SRRM4A7MD48 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRRM4A7MD48 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRRM4A7MD48 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRRM4A7MD48 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.99■□□□□ 0.47
SRRM4A7MD48 AC239859.2-201ENST00000444165 318 ntBASIC17.99■□□□□ 0.47
SRRM4A7MD48 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRRM4A7MD48 KRT125P-201ENST00000546827 989 ntBASIC17.99■□□□□ 0.47
SRRM4A7MD48 MIR4787-201ENST00000607364 84 ntBASIC17.99■□□□□ 0.47
SRRM4A7MD48 AL117328.2-201ENST00000624617 1940 ntBASIC17.99■□□□□ 0.47
SRRM4A7MD48 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRRM4A7MD48 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRRM4A7MD48 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
SRRM4A7MD48 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SRRM4A7MD48 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SRRM4A7MD48 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.98■□□□□ 0.47
SRRM4A7MD48 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SRRM4A7MD48 AC144652.1-201ENST00000609974 1624 ntBASIC17.98■□□□□ 0.47
SRRM4A7MD48 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRRM4A7MD48 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRRM4A7MD48 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SRRM4A7MD48 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms