Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 AL024507.2-201ENST00000606070 2574 ntBASIC16.81■□□□□ 0.28
TRBV6-1A0A0K0K1D8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-1A0A0K0K1D8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-1A0A0K0K1D8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
TRBV6-1A0A0K0K1D8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV6-1A0A0K0K1D8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-1A0A0K0K1D8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV6-1A0A0K0K1D8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 LONRF2P2-201ENST00000439212 571 ntBASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 AL353803.4-201ENST00000565882 1934 ntBASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-1A0A0K0K1D8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 AC080038.3-201ENST00000623346 1952 ntBASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-1A0A0K0K1D8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 AC087742.1-201ENST00000575880 1738 ntBASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV6-1A0A0K0K1D8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms