Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC087741.3-201ENST00000624270 1347 ntBASIC12.3□□□□□ -0.44
MACF1Q9UPN3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MACF1Q9UPN3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.29□□□□□ -0.44
MACF1Q9UPN3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MACF1Q9UPN3 AL391121.1-201ENST00000607967 1349 ntBASIC12.29□□□□□ -0.44
MACF1Q9UPN3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC12.28□□□□□ -0.44
MACF1Q9UPN3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MACF1Q9UPN3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
MACF1Q9UPN3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC12.27□□□□□ -0.44
MACF1Q9UPN3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MACF1Q9UPN3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MACF1Q9UPN3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
MACF1Q9UPN3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MACF1Q9UPN3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MACF1Q9UPN3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC12.25□□□□□ -0.45
MACF1Q9UPN3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MACF1Q9UPN3 MIR639-201ENST00000384974 98 ntBASIC12.25□□□□□ -0.45
MACF1Q9UPN3 ZNRF2P2-203ENST00000454624 420 ntBASIC12.25□□□□□ -0.45
MACF1Q9UPN3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC12.24□□□□□ -0.45
MACF1Q9UPN3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MACF1Q9UPN3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MACF1Q9UPN3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MACF1Q9UPN3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC12.22□□□□□ -0.45
MACF1Q9UPN3 ABHD17AP3-201ENST00000503096 1137 ntBASIC12.22□□□□□ -0.45
MACF1Q9UPN3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
MACF1Q9UPN3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MACF1Q9UPN3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.22□□□□□ -0.45
MACF1Q9UPN3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
MACF1Q9UPN3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
MACF1Q9UPN3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC12.21□□□□□ -0.45
MACF1Q9UPN3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MACF1Q9UPN3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC12.21□□□□□ -0.46
MACF1Q9UPN3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
MACF1Q9UPN3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MACF1Q9UPN3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MACF1Q9UPN3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC12.2□□□□□ -0.46
MACF1Q9UPN3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MACF1Q9UPN3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MACF1Q9UPN3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC12.17□□□□□ -0.46
MACF1Q9UPN3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MACF1Q9UPN3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.16□□□□□ -0.46
MACF1Q9UPN3 AC044849.2-201ENST00000606596 710 ntBASIC12.15□□□□□ -0.46
MACF1Q9UPN3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC12.15□□□□□ -0.46
MACF1Q9UPN3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MACF1Q9UPN3 DUX4L28-201ENST00000623687 678 ntBASIC12.14□□□□□ -0.47
MACF1Q9UPN3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
MACF1Q9UPN3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
MACF1Q9UPN3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
MACF1Q9UPN3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
MACF1Q9UPN3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC12.12□□□□□ -0.47
MACF1Q9UPN3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MACF1Q9UPN3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
MACF1Q9UPN3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC12.11□□□□□ -0.47
MACF1Q9UPN3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MACF1Q9UPN3 AC019069.1-201ENST00000610008 1333 ntBASIC12.11□□□□□ -0.47
MACF1Q9UPN3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
MACF1Q9UPN3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC12.1□□□□□ -0.47
MACF1Q9UPN3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MACF1Q9UPN3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
MACF1Q9UPN3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MACF1Q9UPN3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
MACF1Q9UPN3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
MACF1Q9UPN3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
MACF1Q9UPN3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MACF1Q9UPN3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC12.06□□□□□ -0.48
MACF1Q9UPN3 ABHD17AP5-201ENST00000580133 923 ntBASIC12.06□□□□□ -0.48
MACF1Q9UPN3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC12.05□□□□□ -0.48
MACF1Q9UPN3 AL592295.1-201ENST00000400984 884 ntBASIC12.05□□□□□ -0.48
MACF1Q9UPN3 MIR762-201ENST00000390236 83 ntBASIC12.04□□□□□ -0.48
MACF1Q9UPN3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC12.04□□□□□ -0.48
MACF1Q9UPN3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC12.04□□□□□ -0.48
MACF1Q9UPN3 AC016575.1-201ENST00000607026 382 ntBASIC12.04□□□□□ -0.48
MACF1Q9UPN3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MACF1Q9UPN3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC12.04□□□□□ -0.48
MACF1Q9UPN3 CR559946.2-201ENST00000623684 991 ntBASIC12.03□□□□□ -0.48
MACF1Q9UPN3 CHML-205ENST00000638160 705 ntTSL 3 BASIC12.03□□□□□ -0.48
MACF1Q9UPN3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MACF1Q9UPN3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC12.03□□□□□ -0.48
MACF1Q9UPN3 AC005559.1-201ENST00000589661 871 ntBASIC12.02□□□□□ -0.49
MACF1Q9UPN3 MIR935-201ENST00000401179 91 ntBASIC12.02□□□□□ -0.49
MACF1Q9UPN3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
MACF1Q9UPN3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC12□□□□□ -0.49
MACF1Q9UPN3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC12□□□□□ -0.49
MACF1Q9UPN3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12□□□□□ -0.49
MACF1Q9UPN3 RARRES2P2-201ENST00000394842 485 ntBASIC11.99□□□□□ -0.49
MACF1Q9UPN3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MACF1Q9UPN3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MACF1Q9UPN3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC11.98□□□□□ -0.49
MACF1Q9UPN3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MACF1Q9UPN3 AC018358.1-201ENST00000631079 1402 ntBASIC11.97□□□□□ -0.49
MACF1Q9UPN3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC11.97□□□□□ -0.49
MACF1Q9UPN3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC11.97□□□□□ -0.49
MACF1Q9UPN3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MACF1Q9UPN3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MACF1Q9UPN3 MIR3648-2-201ENST00000581792 180 ntBASIC11.95□□□□□ -0.5
MACF1Q9UPN3 MIR3648-1-201ENST00000615959 180 ntBASIC11.95□□□□□ -0.5
MACF1Q9UPN3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MACF1Q9UPN3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC11.95□□□□□ -0.5
MACF1Q9UPN3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MACF1Q9UPN3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms