Protein–RNA interactions for Protein: Q9NRA1

PDGFC, Platelet-derived growth factor C, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFCQ9NRA1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PDGFCQ9NRA1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.77■■■□□ 2.68
PDGFCQ9NRA1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
PDGFCQ9NRA1 AL133380.1-201ENST00000506013 324 ntBASIC31.76■■■□□ 2.67
PDGFCQ9NRA1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PDGFCQ9NRA1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PDGFCQ9NRA1 AL391121.1-201ENST00000607967 1349 ntBASIC31.71■■■□□ 2.67
PDGFCQ9NRA1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDGFCQ9NRA1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDGFCQ9NRA1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.68■■■□□ 2.66
PDGFCQ9NRA1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
PDGFCQ9NRA1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDGFCQ9NRA1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDGFCQ9NRA1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDGFCQ9NRA1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDGFCQ9NRA1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDGFCQ9NRA1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.66■■■□□ 2.66
PDGFCQ9NRA1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.65■■■□□ 2.66
PDGFCQ9NRA1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.64■■■□□ 2.66
PDGFCQ9NRA1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
PDGFCQ9NRA1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PDGFCQ9NRA1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDGFCQ9NRA1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.58■■■□□ 2.65
PDGFCQ9NRA1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.57■■■□□ 2.64
PDGFCQ9NRA1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
PDGFCQ9NRA1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PDGFCQ9NRA1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
PDGFCQ9NRA1 AL162393.1-201ENST00000437852 946 ntBASIC31.55■■■□□ 2.64
PDGFCQ9NRA1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.54■■■□□ 2.64
PDGFCQ9NRA1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
PDGFCQ9NRA1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDGFCQ9NRA1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.5■■■□□ 2.63
PDGFCQ9NRA1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PDGFCQ9NRA1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
PDGFCQ9NRA1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.48■■■□□ 2.63
PDGFCQ9NRA1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.48■■■□□ 2.63
PDGFCQ9NRA1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.46■■■□□ 2.63
PDGFCQ9NRA1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.46■■■□□ 2.63
PDGFCQ9NRA1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PDGFCQ9NRA1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PDGFCQ9NRA1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDGFCQ9NRA1 AP006261.1-201ENST00000584783 668 ntBASIC31.43■■■□□ 2.62
PDGFCQ9NRA1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PDGFCQ9NRA1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PDGFCQ9NRA1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PDGFCQ9NRA1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.39■■■□□ 2.62
PDGFCQ9NRA1 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.39■■■□□ 2.62
PDGFCQ9NRA1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDGFCQ9NRA1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDGFCQ9NRA1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PDGFCQ9NRA1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.37■■■□□ 2.61
PDGFCQ9NRA1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
PDGFCQ9NRA1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
PDGFCQ9NRA1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PDGFCQ9NRA1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDGFCQ9NRA1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.3■■■□□ 2.6
PDGFCQ9NRA1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
PDGFCQ9NRA1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PDGFCQ9NRA1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PDGFCQ9NRA1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.29■■■□□ 2.6
PDGFCQ9NRA1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
PDGFCQ9NRA1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PDGFCQ9NRA1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PDGFCQ9NRA1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.22■■■□□ 2.59
PDGFCQ9NRA1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.22■■■□□ 2.59
PDGFCQ9NRA1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PDGFCQ9NRA1 MIR3665-201ENST00000578708 105 ntBASIC31.21■■■□□ 2.59
PDGFCQ9NRA1 MIR762-201ENST00000390236 83 ntBASIC31.19■■■□□ 2.58
PDGFCQ9NRA1 DUX4L28-201ENST00000623687 678 ntBASIC31.19■■■□□ 2.58
PDGFCQ9NRA1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PDGFCQ9NRA1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
PDGFCQ9NRA1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.17■■■□□ 2.58
PDGFCQ9NRA1 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.17■■■□□ 2.58
PDGFCQ9NRA1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PDGFCQ9NRA1 AC087741.3-201ENST00000624270 1347 ntBASIC31.15■■■□□ 2.58
PDGFCQ9NRA1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PDGFCQ9NRA1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
PDGFCQ9NRA1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PDGFCQ9NRA1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
PDGFCQ9NRA1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.11■■■□□ 2.57
PDGFCQ9NRA1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.1■■■□□ 2.57
PDGFCQ9NRA1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PDGFCQ9NRA1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PDGFCQ9NRA1 AC005559.1-201ENST00000589661 871 ntBASIC31.07■■■□□ 2.56
PDGFCQ9NRA1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.07■■■□□ 2.56
PDGFCQ9NRA1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PDGFCQ9NRA1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
PDGFCQ9NRA1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PDGFCQ9NRA1 WASH5P-204ENST00000632292 975 ntBASIC31.04■■■□□ 2.56
PDGFCQ9NRA1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDGFCQ9NRA1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.03■■■□□ 2.56
PDGFCQ9NRA1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDGFCQ9NRA1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDGFCQ9NRA1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
PDGFCQ9NRA1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDGFCQ9NRA1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.01■■■□□ 2.55
PDGFCQ9NRA1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.01■■■□□ 2.55
PDGFCQ9NRA1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PDGFCQ9NRA1 ABHD17AP4-201ENST00000411545 909 ntBASIC30.99■■■□□ 2.55
PDGFCQ9NRA1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms