Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDLIM7Q9NR12 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.68■■■□□ 2.66
PDLIM7Q9NR12 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PDLIM7Q9NR12 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDLIM7Q9NR12 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDLIM7Q9NR12 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PDLIM7Q9NR12 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.67■■■□□ 2.66
PDLIM7Q9NR12 AP006261.1-201ENST00000584783 668 ntBASIC31.65■■■□□ 2.66
PDLIM7Q9NR12 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
PDLIM7Q9NR12 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
PDLIM7Q9NR12 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.61■■■□□ 2.65
PDLIM7Q9NR12 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PDLIM7Q9NR12 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PDLIM7Q9NR12 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDLIM7Q9NR12 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.59■■■□□ 2.65
PDLIM7Q9NR12 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
PDLIM7Q9NR12 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDLIM7Q9NR12 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.57■■■□□ 2.64
PDLIM7Q9NR12 AL391121.1-201ENST00000607967 1349 ntBASIC31.56■■■□□ 2.64
PDLIM7Q9NR12 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PDLIM7Q9NR12 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDLIM7Q9NR12 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PDLIM7Q9NR12 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
PDLIM7Q9NR12 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PDLIM7Q9NR12 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.51■■■□□ 2.63
PDLIM7Q9NR12 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
PDLIM7Q9NR12 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.5■■■□□ 2.63
PDLIM7Q9NR12 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PDLIM7Q9NR12 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PDLIM7Q9NR12 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDLIM7Q9NR12 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.43■■■□□ 2.62
PDLIM7Q9NR12 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDLIM7Q9NR12 MIR7108-201ENST00000614319 87 ntBASIC31.4■■■□□ 2.62
PDLIM7Q9NR12 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PDLIM7Q9NR12 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PDLIM7Q9NR12 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
PDLIM7Q9NR12 AL133380.1-201ENST00000506013 324 ntBASIC31.38■■■□□ 2.61
PDLIM7Q9NR12 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDLIM7Q9NR12 ABHD17AP4-201ENST00000411545 909 ntBASIC31.37■■■□□ 2.61
PDLIM7Q9NR12 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDLIM7Q9NR12 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDLIM7Q9NR12 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDLIM7Q9NR12 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDLIM7Q9NR12 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDLIM7Q9NR12 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDLIM7Q9NR12 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.33■■■□□ 2.61
PDLIM7Q9NR12 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
PDLIM7Q9NR12 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.31■■■□□ 2.6
PDLIM7Q9NR12 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.31■■■□□ 2.6
PDLIM7Q9NR12 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.29■■■□□ 2.6
PDLIM7Q9NR12 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.28■■■□□ 2.6
PDLIM7Q9NR12 MIR3665-201ENST00000578708 105 ntBASIC31.27■■■□□ 2.6
PDLIM7Q9NR12 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PDLIM7Q9NR12 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
PDLIM7Q9NR12 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDLIM7Q9NR12 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.24■■■□□ 2.59
PDLIM7Q9NR12 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.24■■■□□ 2.59
PDLIM7Q9NR12 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PDLIM7Q9NR12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.2■■■□□ 2.59
PDLIM7Q9NR12 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PDLIM7Q9NR12 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PDLIM7Q9NR12 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
PDLIM7Q9NR12 AC087741.3-201ENST00000624270 1347 ntBASIC31.19■■■□□ 2.58
PDLIM7Q9NR12 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDLIM7Q9NR12 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.15■■■□□ 2.58
PDLIM7Q9NR12 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PDLIM7Q9NR12 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.14■■■□□ 2.58
PDLIM7Q9NR12 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
PDLIM7Q9NR12 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
PDLIM7Q9NR12 DUX4L28-201ENST00000623687 678 ntBASIC31.14■■■□□ 2.58
PDLIM7Q9NR12 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.14■■■□□ 2.58
PDLIM7Q9NR12 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
PDLIM7Q9NR12 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.12■■■□□ 2.57
PDLIM7Q9NR12 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.11■■■□□ 2.57
PDLIM7Q9NR12 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.1■■■□□ 2.57
PDLIM7Q9NR12 HLA-V-202ENST00000446817 847 ntBASIC31.1■■■□□ 2.57
PDLIM7Q9NR12 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.1■■■□□ 2.57
PDLIM7Q9NR12 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PDLIM7Q9NR12 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PDLIM7Q9NR12 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PDLIM7Q9NR12 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.07■■■□□ 2.56
PDLIM7Q9NR12 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
PDLIM7Q9NR12 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.03■■■□□ 2.56
PDLIM7Q9NR12 AC044849.2-201ENST00000606596 710 ntBASIC31.03■■■□□ 2.56
PDLIM7Q9NR12 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDLIM7Q9NR12 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
PDLIM7Q9NR12 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PDLIM7Q9NR12 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.01■■■□□ 2.55
PDLIM7Q9NR12 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDLIM7Q9NR12 CHML-205ENST00000638160 705 ntTSL 3 BASIC31■■■□□ 2.55
PDLIM7Q9NR12 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31■■■□□ 2.55
PDLIM7Q9NR12 MIR762-201ENST00000390236 83 ntBASIC30.98■■■□□ 2.55
PDLIM7Q9NR12 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDLIM7Q9NR12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.96■■■□□ 2.55
PDLIM7Q9NR12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
PDLIM7Q9NR12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
PDLIM7Q9NR12 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.96■■■□□ 2.55
PDLIM7Q9NR12 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDLIM7Q9NR12 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDLIM7Q9NR12 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms