Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBQLN3Q9H347 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBQLN3Q9H347 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBQLN3Q9H347 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBQLN3Q9H347 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.67■■□□□ 1.7
UBQLN3Q9H347 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBQLN3Q9H347 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBQLN3Q9H347 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBQLN3Q9H347 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBQLN3Q9H347 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBQLN3Q9H347 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.64■■□□□ 1.69
UBQLN3Q9H347 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.64■■□□□ 1.69
UBQLN3Q9H347 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
UBQLN3Q9H347 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBQLN3Q9H347 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBQLN3Q9H347 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.62■■□□□ 1.69
UBQLN3Q9H347 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBQLN3Q9H347 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBQLN3Q9H347 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBQLN3Q9H347 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBQLN3Q9H347 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBQLN3Q9H347 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
UBQLN3Q9H347 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.57■■□□□ 1.68
UBQLN3Q9H347 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.55■■□□□ 1.68
UBQLN3Q9H347 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBQLN3Q9H347 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBQLN3Q9H347 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
UBQLN3Q9H347 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
UBQLN3Q9H347 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
UBQLN3Q9H347 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.53■■□□□ 1.68
UBQLN3Q9H347 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
UBQLN3Q9H347 RARRES2P7-201ENST00000567349 469 ntBASIC25.51■■□□□ 1.67
UBQLN3Q9H347 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBQLN3Q9H347 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
UBQLN3Q9H347 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.49■■□□□ 1.67
UBQLN3Q9H347 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
UBQLN3Q9H347 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
UBQLN3Q9H347 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.48■■□□□ 1.67
UBQLN3Q9H347 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
UBQLN3Q9H347 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
UBQLN3Q9H347 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.46■■□□□ 1.67
UBQLN3Q9H347 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
UBQLN3Q9H347 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
UBQLN3Q9H347 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
UBQLN3Q9H347 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.44■■□□□ 1.66
UBQLN3Q9H347 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
UBQLN3Q9H347 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
UBQLN3Q9H347 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.42■■□□□ 1.66
UBQLN3Q9H347 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
UBQLN3Q9H347 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
UBQLN3Q9H347 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBQLN3Q9H347 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBQLN3Q9H347 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.4■■□□□ 1.66
UBQLN3Q9H347 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
UBQLN3Q9H347 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.37■■□□□ 1.65
UBQLN3Q9H347 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.37■■□□□ 1.65
UBQLN3Q9H347 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBQLN3Q9H347 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
UBQLN3Q9H347 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
UBQLN3Q9H347 SETD8P1-201ENST00000623146 1180 ntBASIC25.36■■□□□ 1.65
UBQLN3Q9H347 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.34■■□□□ 1.65
UBQLN3Q9H347 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
UBQLN3Q9H347 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
UBQLN3Q9H347 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
UBQLN3Q9H347 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.31■■□□□ 1.64
UBQLN3Q9H347 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.31■■□□□ 1.64
UBQLN3Q9H347 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
UBQLN3Q9H347 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
UBQLN3Q9H347 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
UBQLN3Q9H347 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
UBQLN3Q9H347 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.29■■□□□ 1.64
UBQLN3Q9H347 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.28■■□□□ 1.64
UBQLN3Q9H347 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
UBQLN3Q9H347 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
UBQLN3Q9H347 AC136428.2-201ENST00000563187 214 ntBASIC25.27■■□□□ 1.64
UBQLN3Q9H347 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
UBQLN3Q9H347 AC097358.2-201ENST00000607541 1159 ntBASIC25.25■■□□□ 1.63
UBQLN3Q9H347 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
UBQLN3Q9H347 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.24■■□□□ 1.63
UBQLN3Q9H347 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
UBQLN3Q9H347 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.23■■□□□ 1.63
UBQLN3Q9H347 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
UBQLN3Q9H347 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
UBQLN3Q9H347 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.2■■□□□ 1.62
UBQLN3Q9H347 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
UBQLN3Q9H347 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
UBQLN3Q9H347 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
UBQLN3Q9H347 AL133380.1-201ENST00000506013 324 ntBASIC25.16■■□□□ 1.62
UBQLN3Q9H347 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
UBQLN3Q9H347 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.15■■□□□ 1.62
UBQLN3Q9H347 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
UBQLN3Q9H347 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.14■■□□□ 1.62
UBQLN3Q9H347 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms