Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SLCO4A1Q96BD0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLCO4A1Q96BD0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLCO4A1Q96BD0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLCO4A1Q96BD0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SLCO4A1Q96BD0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SLCO4A1Q96BD0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLCO4A1Q96BD0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.29■■□□□ 1.8
SLCO4A1Q96BD0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
SLCO4A1Q96BD0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLCO4A1Q96BD0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLCO4A1Q96BD0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.2■■□□□ 1.79
SLCO4A1Q96BD0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.2■■□□□ 1.78
SLCO4A1Q96BD0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.2■■□□□ 1.78
SLCO4A1Q96BD0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLCO4A1Q96BD0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLCO4A1Q96BD0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.19■■□□□ 1.78
SLCO4A1Q96BD0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLCO4A1Q96BD0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLCO4A1Q96BD0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SLCO4A1Q96BD0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SLCO4A1Q96BD0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLCO4A1Q96BD0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLCO4A1Q96BD0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLCO4A1Q96BD0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLCO4A1Q96BD0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLCO4A1Q96BD0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SLCO4A1Q96BD0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SLCO4A1Q96BD0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.14■■□□□ 1.77
SLCO4A1Q96BD0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SLCO4A1Q96BD0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SLCO4A1Q96BD0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SLCO4A1Q96BD0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SLCO4A1Q96BD0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.12■■□□□ 1.77
SLCO4A1Q96BD0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLCO4A1Q96BD0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLCO4A1Q96BD0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SLCO4A1Q96BD0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SLCO4A1Q96BD0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.1■■□□□ 1.77
SLCO4A1Q96BD0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SLCO4A1Q96BD0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLCO4A1Q96BD0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLCO4A1Q96BD0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.07■■□□□ 1.76
SLCO4A1Q96BD0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SLCO4A1Q96BD0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLCO4A1Q96BD0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.04■■□□□ 1.76
SLCO4A1Q96BD0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLCO4A1Q96BD0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLCO4A1Q96BD0 AC120057.4-201ENST00000624722 1615 ntBASIC26.01■■□□□ 1.75
SLCO4A1Q96BD0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26■■□□□ 1.75
SLCO4A1Q96BD0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLCO4A1Q96BD0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26■■□□□ 1.75
SLCO4A1Q96BD0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLCO4A1Q96BD0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLCO4A1Q96BD0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLCO4A1Q96BD0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.97■■□□□ 1.75
SLCO4A1Q96BD0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SLCO4A1Q96BD0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.94■■□□□ 1.74
SLCO4A1Q96BD0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.94■■□□□ 1.74
SLCO4A1Q96BD0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SLCO4A1Q96BD0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SLCO4A1Q96BD0 AC139426.1-201ENST00000568218 2529 ntBASIC25.92■■□□□ 1.74
SLCO4A1Q96BD0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.92■■□□□ 1.74
SLCO4A1Q96BD0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SLCO4A1Q96BD0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SLCO4A1Q96BD0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SLCO4A1Q96BD0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SLCO4A1Q96BD0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
SLCO4A1Q96BD0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
SLCO4A1Q96BD0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SLCO4A1Q96BD0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
SLCO4A1Q96BD0 AC015813.7-201ENST00000623294 581 ntBASIC25.88■■□□□ 1.73
SLCO4A1Q96BD0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLCO4A1Q96BD0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SLCO4A1Q96BD0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.86■■□□□ 1.73
SLCO4A1Q96BD0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.86■■□□□ 1.73
SLCO4A1Q96BD0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLCO4A1Q96BD0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLCO4A1Q96BD0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.86■■□□□ 1.73
SLCO4A1Q96BD0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SLCO4A1Q96BD0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLCO4A1Q96BD0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLCO4A1Q96BD0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SLCO4A1Q96BD0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.82■■□□□ 1.72
SLCO4A1Q96BD0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SLCO4A1Q96BD0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLCO4A1Q96BD0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SLCO4A1Q96BD0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLCO4A1Q96BD0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SLCO4A1Q96BD0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLCO4A1Q96BD0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.77■■□□□ 1.72
SLCO4A1Q96BD0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLCO4A1Q96BD0 AL161658.1-201ENST00000623641 1967 ntBASIC25.75■■□□□ 1.71
SLCO4A1Q96BD0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SLCO4A1Q96BD0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLCO4A1Q96BD0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLCO4A1Q96BD0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SLCO4A1Q96BD0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SLCO4A1Q96BD0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SLCO4A1Q96BD0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms