Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.92■■□□□ 1.26
C11orf42Q8N5U0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.9■■□□□ 1.26
C11orf42Q8N5U0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
C11orf42Q8N5U0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
C11orf42Q8N5U0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.89■■□□□ 1.25
C11orf42Q8N5U0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
C11orf42Q8N5U0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.87■■□□□ 1.25
C11orf42Q8N5U0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
C11orf42Q8N5U0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
C11orf42Q8N5U0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
C11orf42Q8N5U0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
C11orf42Q8N5U0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
C11orf42Q8N5U0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.83■■□□□ 1.25
C11orf42Q8N5U0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
C11orf42Q8N5U0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.82■■□□□ 1.24
C11orf42Q8N5U0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
C11orf42Q8N5U0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
C11orf42Q8N5U0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
C11orf42Q8N5U0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.8■■□□□ 1.24
C11orf42Q8N5U0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.8■■□□□ 1.24
C11orf42Q8N5U0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.79■■□□□ 1.24
C11orf42Q8N5U0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.79■■□□□ 1.24
C11orf42Q8N5U0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.78■■□□□ 1.24
C11orf42Q8N5U0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.78■■□□□ 1.24
C11orf42Q8N5U0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.76■■□□□ 1.23
C11orf42Q8N5U0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
C11orf42Q8N5U0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
C11orf42Q8N5U0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.75■■□□□ 1.23
C11orf42Q8N5U0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.75■■□□□ 1.23
C11orf42Q8N5U0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
C11orf42Q8N5U0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
C11orf42Q8N5U0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
C11orf42Q8N5U0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.73■■□□□ 1.23
C11orf42Q8N5U0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
C11orf42Q8N5U0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
C11orf42Q8N5U0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
C11orf42Q8N5U0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
C11orf42Q8N5U0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.7■■□□□ 1.22
C11orf42Q8N5U0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
C11orf42Q8N5U0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C11orf42Q8N5U0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C11orf42Q8N5U0 RARRES2P7-201ENST00000567349 469 ntBASIC22.69■■□□□ 1.22
C11orf42Q8N5U0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.67■■□□□ 1.22
C11orf42Q8N5U0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
C11orf42Q8N5U0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
C11orf42Q8N5U0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
C11orf42Q8N5U0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
C11orf42Q8N5U0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
C11orf42Q8N5U0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
C11orf42Q8N5U0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
C11orf42Q8N5U0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.61■■□□□ 1.21
C11orf42Q8N5U0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
C11orf42Q8N5U0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
C11orf42Q8N5U0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
C11orf42Q8N5U0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
C11orf42Q8N5U0 SETD8P1-201ENST00000623146 1180 ntBASIC22.6■■□□□ 1.21
C11orf42Q8N5U0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
C11orf42Q8N5U0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
C11orf42Q8N5U0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.58■■□□□ 1.21
C11orf42Q8N5U0 AL133380.1-201ENST00000506013 324 ntBASIC22.57■■□□□ 1.2
C11orf42Q8N5U0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
C11orf42Q8N5U0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.56■■□□□ 1.2
C11orf42Q8N5U0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
C11orf42Q8N5U0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.56■■□□□ 1.2
C11orf42Q8N5U0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
C11orf42Q8N5U0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.54■■□□□ 1.2
C11orf42Q8N5U0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
C11orf42Q8N5U0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
C11orf42Q8N5U0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
C11orf42Q8N5U0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
C11orf42Q8N5U0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
C11orf42Q8N5U0 AC136428.2-201ENST00000563187 214 ntBASIC22.51■■□□□ 1.19
C11orf42Q8N5U0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
C11orf42Q8N5U0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
C11orf42Q8N5U0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
C11orf42Q8N5U0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
C11orf42Q8N5U0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
C11orf42Q8N5U0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
C11orf42Q8N5U0 AC097358.2-201ENST00000607541 1159 ntBASIC22.48■■□□□ 1.19
C11orf42Q8N5U0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.48■■□□□ 1.19
C11orf42Q8N5U0 AC120057.4-201ENST00000624722 1615 ntBASIC22.47■■□□□ 1.19
C11orf42Q8N5U0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
C11orf42Q8N5U0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.47■■□□□ 1.19
C11orf42Q8N5U0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
C11orf42Q8N5U0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.46■■□□□ 1.19
C11orf42Q8N5U0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
C11orf42Q8N5U0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.46■■□□□ 1.19
C11orf42Q8N5U0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
C11orf42Q8N5U0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C11orf42Q8N5U0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
C11orf42Q8N5U0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C11orf42Q8N5U0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.45■■□□□ 1.18
C11orf42Q8N5U0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
C11orf42Q8N5U0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
C11orf42Q8N5U0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.42■■□□□ 1.18
C11orf42Q8N5U0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C11orf42Q8N5U0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
C11orf42Q8N5U0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.42■■□□□ 1.18
C11orf42Q8N5U0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.42■■□□□ 1.18
C11orf42Q8N5U0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms