Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
SHC4Q6S5L8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
SHC4Q6S5L8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SHC4Q6S5L8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.61■■■□□ 2.65
SHC4Q6S5L8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.6■■■□□ 2.65
SHC4Q6S5L8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
SHC4Q6S5L8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
SHC4Q6S5L8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
SHC4Q6S5L8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.57■■■□□ 2.64
SHC4Q6S5L8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.55■■■□□ 2.64
SHC4Q6S5L8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.54■■■□□ 2.64
SHC4Q6S5L8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SHC4Q6S5L8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SHC4Q6S5L8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.53■■■□□ 2.64
SHC4Q6S5L8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
SHC4Q6S5L8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
SHC4Q6S5L8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SHC4Q6S5L8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
SHC4Q6S5L8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SHC4Q6S5L8 DYNLL1-208ENST00000550178 581 ntBASIC31.47■■■□□ 2.63
SHC4Q6S5L8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SHC4Q6S5L8 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.46■■■□□ 2.63
SHC4Q6S5L8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SHC4Q6S5L8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SHC4Q6S5L8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
SHC4Q6S5L8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SHC4Q6S5L8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SHC4Q6S5L8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.42■■■□□ 2.62
SHC4Q6S5L8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SHC4Q6S5L8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SHC4Q6S5L8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.4■■■□□ 2.62
SHC4Q6S5L8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.4■■■□□ 2.62
SHC4Q6S5L8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.39■■■□□ 2.62
SHC4Q6S5L8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SHC4Q6S5L8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SHC4Q6S5L8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SHC4Q6S5L8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SHC4Q6S5L8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.35■■■□□ 2.61
SHC4Q6S5L8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SHC4Q6S5L8 AC120057.4-201ENST00000624722 1615 ntBASIC31.35■■■□□ 2.61
SHC4Q6S5L8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
SHC4Q6S5L8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SHC4Q6S5L8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SHC4Q6S5L8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SHC4Q6S5L8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
SHC4Q6S5L8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SHC4Q6S5L8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
SHC4Q6S5L8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.3■■■□□ 2.6
SHC4Q6S5L8 AL031258.1-201ENST00000623562 325 ntBASIC31.28■■■□□ 2.6
SHC4Q6S5L8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
SHC4Q6S5L8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SHC4Q6S5L8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.26■■■□□ 2.59
SHC4Q6S5L8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.25■■■□□ 2.59
SHC4Q6S5L8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.24■■■□□ 2.59
SHC4Q6S5L8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SHC4Q6S5L8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.23■■■□□ 2.59
SHC4Q6S5L8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.23■■■□□ 2.59
SHC4Q6S5L8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.22■■■□□ 2.59
SHC4Q6S5L8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SHC4Q6S5L8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SHC4Q6S5L8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHC4Q6S5L8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHC4Q6S5L8 AP002365.1-201ENST00000603448 772 ntBASIC31.19■■■□□ 2.58
SHC4Q6S5L8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHC4Q6S5L8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SHC4Q6S5L8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SHC4Q6S5L8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.17■■■□□ 2.58
SHC4Q6S5L8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.17■■■□□ 2.58
SHC4Q6S5L8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.15■■■□□ 2.58
SHC4Q6S5L8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SHC4Q6S5L8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.14■■■□□ 2.57
SHC4Q6S5L8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SHC4Q6S5L8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SHC4Q6S5L8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHC4Q6S5L8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SHC4Q6S5L8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
SHC4Q6S5L8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SHC4Q6S5L8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SHC4Q6S5L8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SHC4Q6S5L8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SHC4Q6S5L8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31■■■□□ 2.55
SHC4Q6S5L8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SHC4Q6S5L8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SHC4Q6S5L8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SHC4Q6S5L8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SHC4Q6S5L8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SHC4Q6S5L8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SHC4Q6S5L8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.94■■■□□ 2.54
SHC4Q6S5L8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SHC4Q6S5L8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SHC4Q6S5L8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SHC4Q6S5L8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.91■■■□□ 2.54
SHC4Q6S5L8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.9■■■□□ 2.54
SHC4Q6S5L8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.9■■■□□ 2.54
SHC4Q6S5L8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SHC4Q6S5L8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SHC4Q6S5L8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SHC4Q6S5L8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SHC4Q6S5L8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
SHC4Q6S5L8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 210.9 ms