Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.61■■□□□ 1.21
LDLRAD2Q5SZI1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.6■■□□□ 1.21
LDLRAD2Q5SZI1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LDLRAD2Q5SZI1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
LDLRAD2Q5SZI1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LDLRAD2Q5SZI1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LDLRAD2Q5SZI1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LDLRAD2Q5SZI1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
LDLRAD2Q5SZI1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.55■■□□□ 1.2
LDLRAD2Q5SZI1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.54■■□□□ 1.2
LDLRAD2Q5SZI1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LDLRAD2Q5SZI1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LDLRAD2Q5SZI1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.53■■□□□ 1.2
LDLRAD2Q5SZI1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 RARRES2P7-201ENST00000567349 469 ntBASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.51■■□□□ 1.19
LDLRAD2Q5SZI1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LDLRAD2Q5SZI1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LDLRAD2Q5SZI1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LDLRAD2Q5SZI1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.48■■□□□ 1.19
LDLRAD2Q5SZI1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LDLRAD2Q5SZI1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.47■■□□□ 1.19
LDLRAD2Q5SZI1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LDLRAD2Q5SZI1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.46■■□□□ 1.19
LDLRAD2Q5SZI1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LDLRAD2Q5SZI1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LDLRAD2Q5SZI1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
LDLRAD2Q5SZI1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LDLRAD2Q5SZI1 SETD8P1-201ENST00000623146 1180 ntBASIC22.42■■□□□ 1.18
LDLRAD2Q5SZI1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LDLRAD2Q5SZI1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.4■■□□□ 1.18
LDLRAD2Q5SZI1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LDLRAD2Q5SZI1 AC136428.2-201ENST00000563187 214 ntBASIC22.36■■□□□ 1.17
LDLRAD2Q5SZI1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.36■■□□□ 1.17
LDLRAD2Q5SZI1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LDLRAD2Q5SZI1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.35■■□□□ 1.17
LDLRAD2Q5SZI1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 AL133380.1-201ENST00000506013 324 ntBASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LDLRAD2Q5SZI1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LDLRAD2Q5SZI1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.32■■□□□ 1.16
LDLRAD2Q5SZI1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 AC097358.2-201ENST00000607541 1159 ntBASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.3■■□□□ 1.16
LDLRAD2Q5SZI1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LDLRAD2Q5SZI1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.28■■□□□ 1.16
LDLRAD2Q5SZI1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LDLRAD2Q5SZI1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.27■■□□□ 1.16
LDLRAD2Q5SZI1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LDLRAD2Q5SZI1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LDLRAD2Q5SZI1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.24■■□□□ 1.15
LDLRAD2Q5SZI1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LDLRAD2Q5SZI1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LDLRAD2Q5SZI1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
LDLRAD2Q5SZI1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.22■■□□□ 1.15
LDLRAD2Q5SZI1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
LDLRAD2Q5SZI1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LDLRAD2Q5SZI1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.2■■□□□ 1.14
LDLRAD2Q5SZI1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.2■■□□□ 1.14
LDLRAD2Q5SZI1 CAHM-201ENST00000604200 896 ntBASIC22.19■■□□□ 1.14
LDLRAD2Q5SZI1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LDLRAD2Q5SZI1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LDLRAD2Q5SZI1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.18■■□□□ 1.14
LDLRAD2Q5SZI1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LDLRAD2Q5SZI1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.17■■□□□ 1.14
LDLRAD2Q5SZI1 AC120057.4-201ENST00000624722 1615 ntBASIC22.17■■□□□ 1.14
LDLRAD2Q5SZI1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LDLRAD2Q5SZI1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.14■■□□□ 1.13
LDLRAD2Q5SZI1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LDLRAD2Q5SZI1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LDLRAD2Q5SZI1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LDLRAD2Q5SZI1 SUZ12P1-203ENST00000578195 985 ntBASIC22.13■■□□□ 1.13
LDLRAD2Q5SZI1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
LDLRAD2Q5SZI1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LDLRAD2Q5SZI1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
LDLRAD2Q5SZI1 AL391121.1-201ENST00000607967 1349 ntBASIC22.11■■□□□ 1.13
LDLRAD2Q5SZI1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
LDLRAD2Q5SZI1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LDLRAD2Q5SZI1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LDLRAD2Q5SZI1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.08■■□□□ 1.13
LDLRAD2Q5SZI1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms