Protein–RNA interactions for Protein: Q4G0N8

SLC9C1, Sodium/hydrogen exchanger 10, humanhuman

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9C1Q4G0N8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.61■■■□□ 2.81
SLC9C1Q4G0N8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SLC9C1Q4G0N8 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.58■■■□□ 2.81
SLC9C1Q4G0N8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
SLC9C1Q4G0N8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SLC9C1Q4G0N8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
SLC9C1Q4G0N8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.56■■■□□ 2.8
SLC9C1Q4G0N8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SLC9C1Q4G0N8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SLC9C1Q4G0N8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SLC9C1Q4G0N8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
SLC9C1Q4G0N8 HLA-V-202ENST00000446817 847 ntBASIC32.5■■■□□ 2.79
SLC9C1Q4G0N8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.49■■■□□ 2.79
SLC9C1Q4G0N8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
SLC9C1Q4G0N8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.47■■■□□ 2.79
SLC9C1Q4G0N8 MIR3665-201ENST00000578708 105 ntBASIC32.46■■■□□ 2.79
SLC9C1Q4G0N8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.45■■■□□ 2.79
SLC9C1Q4G0N8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SLC9C1Q4G0N8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.44■■■□□ 2.78
SLC9C1Q4G0N8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
SLC9C1Q4G0N8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
SLC9C1Q4G0N8 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.42■■■□□ 2.78
SLC9C1Q4G0N8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SLC9C1Q4G0N8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.41■■■□□ 2.78
SLC9C1Q4G0N8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SLC9C1Q4G0N8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SLC9C1Q4G0N8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SLC9C1Q4G0N8 AL133380.1-201ENST00000506013 324 ntBASIC32.33■■■□□ 2.77
SLC9C1Q4G0N8 AC087741.3-201ENST00000624270 1347 ntBASIC32.32■■■□□ 2.76
SLC9C1Q4G0N8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.32■■■□□ 2.76
SLC9C1Q4G0N8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SLC9C1Q4G0N8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.31■■■□□ 2.76
SLC9C1Q4G0N8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.31■■■□□ 2.76
SLC9C1Q4G0N8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SLC9C1Q4G0N8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SLC9C1Q4G0N8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
SLC9C1Q4G0N8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SLC9C1Q4G0N8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SLC9C1Q4G0N8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.27■■■□□ 2.76
SLC9C1Q4G0N8 AC145285.7-201ENST00000614819 1539 ntBASIC32.26■■■□□ 2.75
SLC9C1Q4G0N8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.23■■■□□ 2.75
SLC9C1Q4G0N8 AC044849.2-201ENST00000606596 710 ntBASIC32.23■■■□□ 2.75
SLC9C1Q4G0N8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.23■■■□□ 2.75
SLC9C1Q4G0N8 DUX4L28-201ENST00000623687 678 ntBASIC32.21■■■□□ 2.75
SLC9C1Q4G0N8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.21■■■□□ 2.75
SLC9C1Q4G0N8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.19■■■□□ 2.74
SLC9C1Q4G0N8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.17■■■□□ 2.74
SLC9C1Q4G0N8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
SLC9C1Q4G0N8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SLC9C1Q4G0N8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SLC9C1Q4G0N8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
SLC9C1Q4G0N8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
SLC9C1Q4G0N8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.14■■■□□ 2.74
SLC9C1Q4G0N8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
SLC9C1Q4G0N8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
SLC9C1Q4G0N8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.1■■■□□ 2.73
SLC9C1Q4G0N8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.09■■■□□ 2.73
SLC9C1Q4G0N8 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.09■■■□□ 2.73
SLC9C1Q4G0N8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.08■■■□□ 2.73
SLC9C1Q4G0N8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.07■■■□□ 2.72
SLC9C1Q4G0N8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.06■■■□□ 2.72
SLC9C1Q4G0N8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SLC9C1Q4G0N8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.03■■■□□ 2.72
SLC9C1Q4G0N8 MIR762-201ENST00000390236 83 ntBASIC32.03■■■□□ 2.72
SLC9C1Q4G0N8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.03■■■□□ 2.72
SLC9C1Q4G0N8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.03■■■□□ 2.72
SLC9C1Q4G0N8 AC005559.1-201ENST00000589661 871 ntBASIC32.03■■■□□ 2.72
SLC9C1Q4G0N8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SLC9C1Q4G0N8 ZNRF2P2-203ENST00000454624 420 ntBASIC32.02■■■□□ 2.72
SLC9C1Q4G0N8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.01■■■□□ 2.72
SLC9C1Q4G0N8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SLC9C1Q4G0N8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32■■■□□ 2.71
SLC9C1Q4G0N8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.99■■■□□ 2.71
SLC9C1Q4G0N8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SLC9C1Q4G0N8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.99■■■□□ 2.71
SLC9C1Q4G0N8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SLC9C1Q4G0N8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.94■■■□□ 2.7
SLC9C1Q4G0N8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
SLC9C1Q4G0N8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SLC9C1Q4G0N8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SLC9C1Q4G0N8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.91■■■□□ 2.7
SLC9C1Q4G0N8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SLC9C1Q4G0N8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.91■■■□□ 2.7
SLC9C1Q4G0N8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SLC9C1Q4G0N8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
SLC9C1Q4G0N8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SLC9C1Q4G0N8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SLC9C1Q4G0N8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.88■■■□□ 2.69
SLC9C1Q4G0N8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SLC9C1Q4G0N8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
SLC9C1Q4G0N8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SLC9C1Q4G0N8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SLC9C1Q4G0N8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.83■■■□□ 2.69
SLC9C1Q4G0N8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SLC9C1Q4G0N8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SLC9C1Q4G0N8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
SLC9C1Q4G0N8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.81■■■□□ 2.68
SLC9C1Q4G0N8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SLC9C1Q4G0N8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SLC9C1Q4G0N8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms