Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CHGBP05060 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC33.69■■■□□ 2.98
CHGBP05060 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
CHGBP05060 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
CHGBP05060 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
CHGBP05060 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.67■■■□□ 2.98
CHGBP05060 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
CHGBP05060 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
CHGBP05060 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
CHGBP05060 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.62■■■□□ 2.97
CHGBP05060 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC33.61■■■□□ 2.97
CHGBP05060 RARRES2P7-201ENST00000567349 469 ntBASIC33.6■■■□□ 2.97
CHGBP05060 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.59■■■□□ 2.97
CHGBP05060 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC33.57■■■□□ 2.96
CHGBP05060 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC33.57■■■□□ 2.96
CHGBP05060 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC33.56■■■□□ 2.96
CHGBP05060 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHGBP05060 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.56■■■□□ 2.96
CHGBP05060 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.56■■■□□ 2.96
CHGBP05060 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CHGBP05060 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33.54■■■□□ 2.96
CHGBP05060 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.54■■■□□ 2.96
CHGBP05060 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CHGBP05060 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
CHGBP05060 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CHGBP05060 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.51■■■□□ 2.95
CHGBP05060 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
CHGBP05060 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHGBP05060 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
CHGBP05060 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.49■■■□□ 2.95
CHGBP05060 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHGBP05060 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
CHGBP05060 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHGBP05060 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHGBP05060 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHGBP05060 SETD8P1-201ENST00000623146 1180 ntBASIC33.45■■■□□ 2.95
CHGBP05060 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
CHGBP05060 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CHGBP05060 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.41■■■□□ 2.94
CHGBP05060 AC136428.2-201ENST00000563187 214 ntBASIC33.41■■■□□ 2.94
CHGBP05060 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC33.41■■■□□ 2.94
CHGBP05060 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHGBP05060 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CHGBP05060 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.35■■■□□ 2.93
CHGBP05060 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHGBP05060 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHGBP05060 AL133380.1-201ENST00000506013 324 ntBASIC33.32■■■□□ 2.92
CHGBP05060 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
CHGBP05060 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.32■■■□□ 2.92
CHGBP05060 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
CHGBP05060 AC097358.2-201ENST00000607541 1159 ntBASIC33.3■■■□□ 2.92
CHGBP05060 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CHGBP05060 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC33.29■■■□□ 2.92
CHGBP05060 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC33.29■■■□□ 2.92
CHGBP05060 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.28■■■□□ 2.92
CHGBP05060 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC33.28■■■□□ 2.92
CHGBP05060 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC33.28■■■□□ 2.92
CHGBP05060 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC33.28■■■□□ 2.92
CHGBP05060 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
CHGBP05060 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHGBP05060 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC33.23■■■□□ 2.91
CHGBP05060 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHGBP05060 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
CHGBP05060 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CHGBP05060 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CHGBP05060 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CHGBP05060 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.18■■■□□ 2.9
CHGBP05060 CAHM-201ENST00000604200 896 ntBASIC33.17■■■□□ 2.9
CHGBP05060 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.17■■■□□ 2.9
CHGBP05060 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.15■■■□□ 2.9
CHGBP05060 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CHGBP05060 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CHGBP05060 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHGBP05060 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
CHGBP05060 SUZ12P1-203ENST00000578195 985 ntBASIC33.08■■■□□ 2.89
CHGBP05060 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.08■■■□□ 2.89
CHGBP05060 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CHGBP05060 AC120057.4-201ENST00000624722 1615 ntBASIC33.06■■■□□ 2.88
CHGBP05060 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CHGBP05060 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.03■■■□□ 2.88
CHGBP05060 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CHGBP05060 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CHGBP05060 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHGBP05060 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHGBP05060 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHGBP05060 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHGBP05060 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHGBP05060 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.99■■■□□ 2.87
CHGBP05060 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.99■■■□□ 2.87
CHGBP05060 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHGBP05060 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.98■■■□□ 2.87
CHGBP05060 AL391121.1-201ENST00000607967 1349 ntBASIC32.98■■■□□ 2.87
CHGBP05060 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
CHGBP05060 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CHGBP05060 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.97■■■□□ 2.87
CHGBP05060 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
CHGBP05060 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
CHGBP05060 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CHGBP05060 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHGBP05060 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms