Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF253O75346 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF253O75346 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF253O75346 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF253O75346 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
ZNF253O75346 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF253O75346 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF253O75346 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF253O75346 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF253O75346 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.37■■□□□ 1.01
ZNF253O75346 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF253O75346 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.37■■□□□ 1.01
ZNF253O75346 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF253O75346 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF253O75346 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF253O75346 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF253O75346 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF253O75346 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF253O75346 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF253O75346 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF253O75346 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF253O75346 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF253O75346 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF253O75346 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF253O75346 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ZNF253O75346 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF253O75346 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF253O75346 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZNF253O75346 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.27■■□□□ 1
ZNF253O75346 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF253O75346 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF253O75346 AC139426.1-201ENST00000568218 2529 ntBASIC21.21■□□□□ 0.99
ZNF253O75346 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF253O75346 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF253O75346 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ZNF253O75346 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF253O75346 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF253O75346 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF253O75346 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF253O75346 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZNF253O75346 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF253O75346 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF253O75346 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF253O75346 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF253O75346 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF253O75346 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ZNF253O75346 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF253O75346 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF253O75346 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF253O75346 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF253O75346 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ZNF253O75346 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF253O75346 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF253O75346 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF253O75346 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF253O75346 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.07■□□□□ 0.96
ZNF253O75346 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF253O75346 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF253O75346 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF253O75346 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF253O75346 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF253O75346 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.02■□□□□ 0.96
ZNF253O75346 AC006077.2-201ENST00000623591 457 ntBASIC21.02■□□□□ 0.96
ZNF253O75346 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF253O75346 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF253O75346 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF253O75346 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ZNF253O75346 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF253O75346 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF253O75346 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ZNF253O75346 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF253O75346 AC120057.4-201ENST00000624722 1615 ntBASIC20.98■□□□□ 0.95
ZNF253O75346 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
ZNF253O75346 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF253O75346 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF253O75346 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF253O75346 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF253O75346 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF253O75346 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF253O75346 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF253O75346 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF253O75346 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF253O75346 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF253O75346 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF253O75346 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF253O75346 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF253O75346 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF253O75346 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF253O75346 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF253O75346 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF253O75346 ABCB10P1-201ENST00000614297 2181 ntBASIC20.9■□□□□ 0.94
ZNF253O75346 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ZNF253O75346 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF253O75346 ABCB10P3-201ENST00000561950 2166 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms