Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 GPAT4-208ENST00000521184 572 ntTSL 411.15□□□□□ -0.629e-7■■■■□ 23.8
EIF3DO15371 ZEB1-206ENST00000488625 6026 ntTSL 1 (best)10.53□□□□□ -0.729e-7■■■■□ 23.8
EIF3DO15371 GPAT4-207ENST00000521121 520 ntTSL 310.42□□□□□ -0.749e-7■■■■□ 23.8
EIF3DO15371 ZEB1-222ENST00000561212 1500 ntTSL 58.16□□□□□ -1.19e-7■■■■□ 23.8
EIF3DO15371 ZEB1-223ENST00000561304 1383 ntTSL 1 (best)7.97□□□□□ -1.139e-7■■■■□ 23.8
EIF3DO15371 ZEB1-203ENST00000424869 887 ntTSL 57.85□□□□□ -1.159e-7■■■■□ 23.8
EIF3DO15371 MAD1L1-217ENST00000469871 477 ntTSL 37.67□□□□□ -1.189e-7■■■■□ 23.8
EIF3DO15371 ZEB1-204ENST00000437844 6246 ntTSL 1 (best)7.05□□□□□ -1.289e-7■■■■□ 23.8
EIF3DO15371 ZEB1-217ENST00000559858 2745 ntTSL 1 (best)6.95□□□□□ -1.39e-7■■■■□ 23.8
EIF3DO15371 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.49e-7■■■■□ 23.8
EIF3DO15371 ZEB1-211ENST00000558440 886 ntTSL 1 (best)6.27□□□□□ -1.419e-7■■■■□ 23.8
EIF3DO15371 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.439e-7■■■■□ 23.8
EIF3DO15371 ZEB1-209ENST00000542879 3645 ntTSL 26.07□□□□□ -1.449e-7■■■■□ 23.8
EIF3DO15371 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.539e-7■■■■□ 23.8
EIF3DO15371 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.549e-7■■■■□ 23.8
EIF3DO15371 RTEL1-210ENST00000496816 2222 ntTSL 1 (best)21.32■■□□□ 17e-8■■■■□ 23.6
EIF3DO15371 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.52■□□□□ 0.887e-8■■■■□ 23.6
EIF3DO15371 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.91■■□□□ 1.11e-6■■■■□ 23.4
EIF3DO15371 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.581e-6■■■■□ 23.4
EIF3DO15371 RPH3AL-219ENST00000576001 647 ntTSL 316.81■□□□□ 0.281e-6■■■■□ 23.4
EIF3DO15371 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.271e-6■■■■□ 23.4
EIF3DO15371 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.57■□□□□ 0.241e-6■■■■□ 23.4
EIF3DO15371 MYL12A-208ENST00000580353 565 ntTSL 217.42■□□□□ 0.387e-8■■■■□ 23.3
EIF3DO15371 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.487e-8■■■■□ 23.3
EIF3DO15371 MYL12A-211ENST00000585090 614 ntTSL 311.41□□□□□ -0.587e-8■■■■□ 23.3
EIF3DO15371 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.657e-8■■■■□ 23.3
EIF3DO15371 MYL12A-210ENST00000583449 334 ntTSL 210.84□□□□□ -0.677e-8■■■■□ 23.3
EIF3DO15371 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.747e-8■■■■□ 23.3
EIF3DO15371 EBNA1BP2-208ENST00000483082 759 ntTSL 218.55■□□□□ 0.569e-7■■■■□ 23.1
EIF3DO15371 EBNA1BP2-206ENST00000472982 1008 ntTSL 217.45■□□□□ 0.389e-7■■■■□ 23.1
EIF3DO15371 EBNA1BP2-209ENST00000491223 680 ntTSL 213.83□□□□□ -0.29e-7■■■■□ 23.1
EIF3DO15371 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC13.54□□□□□ -0.249e-7■■■■□ 23.1
EIF3DO15371 EBNA1BP2-203ENST00000461557 741 ntTSL 510.94□□□□□ -0.669e-7■■■■□ 23.1
EIF3DO15371 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.779e-7■■■■□ 23.1
EIF3DO15371 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC14□□□□□ -0.178e-7■■■■□ 23.1
EIF3DO15371 LRBA-211ENST00000513021 568 ntTSL 410□□□□□ -0.818e-7■■■■□ 23.1
EIF3DO15371 NPIPP1-203ENST00000547107 1071 ntBASIC8.51□□□□□ -1.058e-7■■■■□ 23.1
EIF3DO15371 NPIPP1-201ENST00000448011 575 ntTSL 47.68□□□□□ -1.188e-7■■■■□ 23.1
EIF3DO15371 LRBA-207ENST00000509835 5578 ntTSL 1 (best)7.09□□□□□ -1.278e-7■■■■□ 23.1
EIF3DO15371 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.72■■□□□ 1.072e-7■■■■□ 23
EIF3DO15371 PDXDC2P-206ENST00000534700 1315 ntBASIC15.28■□□□□ 0.042e-7■■■■□ 23
EIF3DO15371 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 514.66□□□□□ -0.062e-7■■■■□ 23
EIF3DO15371 PDXDC2P-NPIPB14P-203ENST00000529089 1580 ntTSL 213.03□□□□□ -0.322e-7■■■■□ 23
EIF3DO15371 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC12.33□□□□□ -0.442e-7■■■■□ 23
EIF3DO15371 PDXDC2P-205ENST00000534580 566 ntTSL 47.66□□□□□ -1.182e-7■■■■□ 23
EIF3DO15371 PDXDC2P-204ENST00000533264 564 ntTSL 46.35□□□□□ -1.392e-7■■■■□ 23
EIF3DO15371 GUF1-204ENST00000513775 1219 ntTSL 1 (best)24.3■■□□□ 1.482e-6■■■■□ 22.9
EIF3DO15371 PSPC1-204ENST00000492741 1709 ntTSL 224.29■■□□□ 1.482e-6■■■■□ 22.9
EIF3DO15371 RHBG-208ENST00000620376 1984 ntTSL 224.1■■□□□ 1.452e-6■■■■□ 22.9
EIF3DO15371 RHBG-201ENST00000451864 1927 ntTSL 223.59■■□□□ 1.372e-6■■■■□ 22.9
EIF3DO15371 NRDC-211ENST00000491410 1020 ntTSL 221.37■■□□□ 1.012e-6■■■■□ 22.9
EIF3DO15371 PSPC1-203ENST00000471658 1647 ntTSL 1 (best)21.11■□□□□ 0.972e-6■■■■□ 22.9
EIF3DO15371 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.952e-6■■■■□ 22.9
EIF3DO15371 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.832e-6■■■■□ 22.9
EIF3DO15371 PSPC1-202ENST00000427943 866 ntTSL 519.84■□□□□ 0.772e-6■■■■□ 22.9
EIF3DO15371 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.612e-6■■■■□ 22.9
EIF3DO15371 RHBG-205ENST00000612897 1862 ntTSL 1 (best)18.55■□□□□ 0.562e-6■■■■□ 22.9
EIF3DO15371 NRDC-205ENST00000468722 754 ntTSL 316.67■□□□□ 0.262e-6■■■■□ 22.9
EIF3DO15371 RHBG-206ENST00000613460 1912 ntTSL 1 (best)15.47■□□□□ 0.072e-6■■■■□ 22.9
EIF3DO15371 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.062e-6■■■■□ 22.9
EIF3DO15371 RHBG-207ENST00000618120 2424 ntTSL 214.65□□□□□ -0.062e-6■■■■□ 22.9
EIF3DO15371 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.092e-6■■■■□ 22.9
EIF3DO15371 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.112e-6■■■■□ 22.9
EIF3DO15371 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC14.26□□□□□ -0.132e-6■■■■□ 22.9
EIF3DO15371 RHBG-203ENST00000494874 324 ntTSL 311.22□□□□□ -0.612e-6■■■■□ 22.9
EIF3DO15371 FRAS1-205ENST00000509802 564 ntTSL 58.18□□□□□ -1.12e-6■■■■□ 22.9
EIF3DO15371 GUF1-202ENST00000506793 3970 ntTSL 56.94□□□□□ -1.32e-6■■■■□ 22.9
EIF3DO15371 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.92□□□□□ -1.141e-6■■■■□ 22.3
EIF3DO15371 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.211e-6■■■■□ 22.3
EIF3DO15371 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.133e-6■■■■□ 22.3
EIF3DO15371 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.2■□□□□ 0.823e-6■■■■□ 22.3
EIF3DO15371 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.1■□□□□ 0.013e-6■■■■□ 22.3
EIF3DO15371 XXYLT1-210ENST00000491138 738 ntTSL 323.97■■□□□ 1.432e-6■■■■□ 22.1
EIF3DO15371 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.1■■□□□ 1.132e-6■■■■□ 22.1
EIF3DO15371 XXYLT1-208ENST00000473200 698 ntTSL 222.1■■□□□ 1.132e-6■■■■□ 22.1
EIF3DO15371 XXYLT1-203ENST00000418940 582 ntTSL 420.52■□□□□ 0.882e-6■■■■□ 22.1
EIF3DO15371 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.722e-6■■■■□ 22.1
EIF3DO15371 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.9■□□□□ 0.622e-6■■■■□ 22.1
EIF3DO15371 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.19■□□□□ 0.342e-6■■■■□ 22.1
EIF3DO15371 DRD4-202ENST00000528733 361 ntTSL 316.19■□□□□ 0.184e-6■■■■□ 22
EIF3DO15371 CPSF1-214ENST00000622776 1029 ntTSL 525.37■■□□□ 1.653e-6■■■■□ 21.9
EIF3DO15371 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.753e-6■■■■□ 21.9
EIF3DO15371 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.42■□□□□ 0.73e-6■■■■□ 21.9
EIF3DO15371 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.553e-6■■■■□ 21.9
EIF3DO15371 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.393e-6■■■■□ 21.9
EIF3DO15371 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.313e-6■■■■□ 21.9
EIF3DO15371 MYL6-204ENST00000546630 544 ntTSL 1 (best)16.14■□□□□ 0.173e-6■■■■□ 21.9
EIF3DO15371 MYL6-216ENST00000550184 1564 ntTSL 516.03■□□□□ 0.163e-6■■■■□ 21.9
EIF3DO15371 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.13e-6■■■■□ 21.9
EIF3DO15371 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.13e-6■■■■□ 21.9
EIF3DO15371 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.13e-6■■■■□ 21.9
EIF3DO15371 MYL6-210ENST00000548400 573 ntTSL 3 BASIC14.12□□□□□ -0.153e-6■■■■□ 21.9
EIF3DO15371 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.84□□□□□ -0.193e-6■■■■□ 21.9
EIF3DO15371 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.273e-6■■■■□ 21.9
EIF3DO15371 MYL6-208ENST00000547703 675 ntTSL 513.35□□□□□ -0.273e-6■■■■□ 21.9
EIF3DO15371 MYL6-212ENST00000548725 582 ntTSL 212.97□□□□□ -0.333e-6■■■■□ 21.9
EIF3DO15371 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC12.05□□□□□ -0.481e-16■■■■□ 21.9
EIF3DO15371 MMADHC-201ENST00000303319 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.493e-6■■■■□ 21.9
EIF3DO15371 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.691e-16■■■■□ 21.9
EIF3DO15371 MYL6-206ENST00000547408 683 ntTSL 3 BASIC10.38□□□□□ -0.753e-6■■■■□ 21.9
Retrieved 100 of 4,069 protein–RNA pairs in 127.2 ms