RNA–Protein interactions for RNA: ENST00000448011.3

NPIPP1-201, Transcript of nuclear pore complex interacting protein pseudogene 1, humanhuman

TSL 4

Gene NPIPP1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPP1-201ENST00000448011 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
NPIPP1-201ENST00000448011 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
NPIPP1-201ENST00000448011 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
NPIPP1-201ENST00000448011 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
NPIPP1-201ENST00000448011 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
NPIPP1-201ENST00000448011 FOXD1Q16676 465 aa16.6■□□□□ 0.25
NPIPP1-201ENST00000448011 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
NPIPP1-201ENST00000448011 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
NPIPP1-201ENST00000448011 ABCC9O60706 1549 aa15.94■□□□□ 0.14
NPIPP1-201ENST00000448011 MSH5O43196 834 aa15.57■□□□□ 0.08
NPIPP1-201ENST00000448011 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
NPIPP1-201ENST00000448011 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
NPIPP1-201ENST00000448011 ADRA2BP18089 450 aa15.49■□□□□ 0.07
NPIPP1-201ENST00000448011 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
NPIPP1-201ENST00000448011 NACADO15069 1562 aa15.16■□□□□ 0.02
NPIPP1-201ENST00000448011 POTEDQ86YR6 584 aa15.03■□□□□ -0
NPIPP1-201ENST00000448011 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
NPIPP1-201ENST00000448011 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
NPIPP1-201ENST00000448011 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
NPIPP1-201ENST00000448011 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
NPIPP1-201ENST00000448011 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
NPIPP1-201ENST00000448011 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
NPIPP1-201ENST00000448011 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
NPIPP1-201ENST00000448011 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
NPIPP1-201ENST00000448011 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
NPIPP1-201ENST00000448011 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
NPIPP1-201ENST00000448011 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
NPIPP1-201ENST00000448011 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
NPIPP1-201ENST00000448011 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
NPIPP1-201ENST00000448011 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
NPIPP1-201ENST00000448011 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
NPIPP1-201ENST00000448011 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
NPIPP1-201ENST00000448011 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
NPIPP1-201ENST00000448011 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
NPIPP1-201ENST00000448011 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
NPIPP1-201ENST00000448011 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
NPIPP1-201ENST00000448011 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
NPIPP1-201ENST00000448011 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
NPIPP1-201ENST00000448011 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
NPIPP1-201ENST00000448011 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
NPIPP1-201ENST00000448011 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
NPIPP1-201ENST00000448011 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
NPIPP1-201ENST00000448011 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
NPIPP1-201ENST00000448011 CUX2O14529 1486 aa13.74□□□□□ -0.21
NPIPP1-201ENST00000448011 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
NPIPP1-201ENST00000448011 NESP48681 1621 aa13.71□□□□□ -0.22
NPIPP1-201ENST00000448011 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
NPIPP1-201ENST00000448011 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
NPIPP1-201ENST00000448011 WIZO95785 1651 aa13.65□□□□□ -0.22
NPIPP1-201ENST00000448011 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
NPIPP1-201ENST00000448011 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
NPIPP1-201ENST00000448011 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
NPIPP1-201ENST00000448011 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
NPIPP1-201ENST00000448011 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
NPIPP1-201ENST00000448011 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
NPIPP1-201ENST00000448011 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
NPIPP1-201ENST00000448011 NCBP3Q53F19 620 aaKnown RBP13.5□□□□□ -0.25
NPIPP1-201ENST00000448011 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
NPIPP1-201ENST00000448011 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
NPIPP1-201ENST00000448011 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
NPIPP1-201ENST00000448011 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
NPIPP1-201ENST00000448011 WDR62O43379 1518 aa13.42□□□□□ -0.26
NPIPP1-201ENST00000448011 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
NPIPP1-201ENST00000448011 CFTRP13569 1480 aa13.39□□□□□ -0.27
NPIPP1-201ENST00000448011 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
NPIPP1-201ENST00000448011 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
NPIPP1-201ENST00000448011 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
NPIPP1-201ENST00000448011 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
NPIPP1-201ENST00000448011 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
NPIPP1-201ENST00000448011 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
NPIPP1-201ENST00000448011 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
NPIPP1-201ENST00000448011 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
NPIPP1-201ENST00000448011 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
NPIPP1-201ENST00000448011 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
NPIPP1-201ENST00000448011 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
NPIPP1-201ENST00000448011 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
NPIPP1-201ENST00000448011 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
NPIPP1-201ENST00000448011 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
NPIPP1-201ENST00000448011 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
NPIPP1-201ENST00000448011 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
NPIPP1-201ENST00000448011 KCNA4P22459 653 aa13.05□□□□□ -0.32
NPIPP1-201ENST00000448011 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
NPIPP1-201ENST00000448011 CHD1O14646 1710 aa13.02□□□□□ -0.33
NPIPP1-201ENST00000448011 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
NPIPP1-201ENST00000448011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.334e-9■■■■■ 29.2
NPIPP1-201ENST00000448011 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
NPIPP1-201ENST00000448011 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
NPIPP1-201ENST00000448011 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
NPIPP1-201ENST00000448011 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
NPIPP1-201ENST00000448011 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
NPIPP1-201ENST00000448011 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
NPIPP1-201ENST00000448011 SOGA1O94964 1423 aa12.94□□□□□ -0.34
NPIPP1-201ENST00000448011 CUX1P39880 1505 aa12.93□□□□□ -0.34
NPIPP1-201ENST00000448011 FGD5Q6ZNL6 1462 aa12.93□□□□□ -0.34
NPIPP1-201ENST00000448011 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
NPIPP1-201ENST00000448011 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
NPIPP1-201ENST00000448011 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
NPIPP1-201ENST00000448011 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
NPIPP1-201ENST00000448011 FBLN2P98095 1184 aa12.85□□□□□ -0.35
NPIPP1-201ENST00000448011 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms