RNA–Protein interactions for RNA: ENST00000303319.9

MMADHC-201, Transcript of methylmalonic aciduria and homocystinuria, cblD type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMADHC, Length 1,436 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMADHC-201ENST00000303319 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
MMADHC-201ENST00000303319 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
MMADHC-201ENST00000303319 SENP3Q9H4L4 574 aaPredicted RBP26.16■■□□□ 1.78
MMADHC-201ENST00000303319 PHF23Q9BUL5 403 aaPredicted RBP25.77■■□□□ 1.72
MMADHC-201ENST00000303319 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
MMADHC-201ENST00000303319 FOXD1Q16676 465 aa24.38■■□□□ 1.49
MMADHC-201ENST00000303319 PLPPR3Q6T4P5 718 aa23.04■■□□□ 1.28
MMADHC-201ENST00000303319 MSH5O43196 834 aa22.91■■□□□ 1.26
MMADHC-201ENST00000303319 PIAS4Q8N2W9 510 aaPredicted RBP22.73■■□□□ 1.23
MMADHC-201ENST00000303319 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
MMADHC-201ENST00000303319 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
MMADHC-201ENST00000303319 ADRA2BP18089 450 aa22.56■■□□□ 1.2
MMADHC-201ENST00000303319 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
MMADHC-201ENST00000303319 ABCC9O60706 1549 aa21.28■■□□□ 1
MMADHC-201ENST00000303319 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
MMADHC-201ENST00000303319 DCAF1Q9Y4B6 1507 aa21.02■□□□□ 0.96
MMADHC-201ENST00000303319 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
MMADHC-201ENST00000303319 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
MMADHC-201ENST00000303319 NACADO15069 1562 aa20.87■□□□□ 0.93
MMADHC-201ENST00000303319 MAPK8IP2Q13387 824 aaPredicted RBP20.76■□□□□ 0.91
MMADHC-201ENST00000303319 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
MMADHC-201ENST00000303319 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
MMADHC-201ENST00000303319 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
MMADHC-201ENST00000303319 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
MMADHC-201ENST00000303319 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
MMADHC-201ENST00000303319 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
MMADHC-201ENST00000303319 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
MMADHC-201ENST00000303319 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
MMADHC-201ENST00000303319 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
MMADHC-201ENST00000303319 HOXD11P31277 338 aaPredicted RBP19.93■□□□□ 0.78
MMADHC-201ENST00000303319 CNKSR2Q8WXI2 1034 aa19.85■□□□□ 0.77
MMADHC-201ENST00000303319 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
MMADHC-201ENST00000303319 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
MMADHC-201ENST00000303319 CACNB1Q02641 598 aaPredicted RBP19.7■□□□□ 0.74
MMADHC-201ENST00000303319 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
MMADHC-201ENST00000303319 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
MMADHC-201ENST00000303319 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
MMADHC-201ENST00000303319 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
MMADHC-201ENST00000303319 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
MMADHC-201ENST00000303319 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
MMADHC-201ENST00000303319 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
MMADHC-201ENST00000303319 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
MMADHC-201ENST00000303319 NCBP3Q53F19 620 aaKnown RBP19.34■□□□□ 0.69
MMADHC-201ENST00000303319 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
MMADHC-201ENST00000303319 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
MMADHC-201ENST00000303319 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
MMADHC-201ENST00000303319 ATAD2BQ9ULI0 1458 aa19.3■□□□□ 0.68
MMADHC-201ENST00000303319 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
MMADHC-201ENST00000303319 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
MMADHC-201ENST00000303319 WIZO95785 1651 aa19.25■□□□□ 0.67
MMADHC-201ENST00000303319 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
MMADHC-201ENST00000303319 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
MMADHC-201ENST00000303319 HMGXB3Q12766 1538 aa19.19■□□□□ 0.66
MMADHC-201ENST00000303319 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
MMADHC-201ENST00000303319 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
MMADHC-201ENST00000303319 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
MMADHC-201ENST00000303319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.62
MMADHC-201ENST00000303319 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
MMADHC-201ENST00000303319 CFTRP13569 1480 aa18.7■□□□□ 0.58
MMADHC-201ENST00000303319 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
MMADHC-201ENST00000303319 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
MMADHC-201ENST00000303319 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
MMADHC-201ENST00000303319 NESP48681 1621 aa18.53■□□□□ 0.56
MMADHC-201ENST00000303319 KCNA4P22459 653 aa18.53■□□□□ 0.56
MMADHC-201ENST00000303319 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
MMADHC-201ENST00000303319 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
MMADHC-201ENST00000303319 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
MMADHC-201ENST00000303319 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
MMADHC-201ENST00000303319 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
MMADHC-201ENST00000303319 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
MMADHC-201ENST00000303319 KIF21AQ7Z4S6 1674 aa18.3■□□□□ 0.52
MMADHC-201ENST00000303319 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
MMADHC-201ENST00000303319 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
MMADHC-201ENST00000303319 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
MMADHC-201ENST00000303319 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
MMADHC-201ENST00000303319 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
MMADHC-201ENST00000303319 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
MMADHC-201ENST00000303319 CUX1P39880 1505 aa18.24■□□□□ 0.51
MMADHC-201ENST00000303319 CAPN15O75808 1086 aa18.23■□□□□ 0.51
MMADHC-201ENST00000303319 DSG3P32926 999 aa18.23■□□□□ 0.51
MMADHC-201ENST00000303319 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
MMADHC-201ENST00000303319 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
MMADHC-201ENST00000303319 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
MMADHC-201ENST00000303319 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
MMADHC-201ENST00000303319 WDR62O43379 1518 aa18.19■□□□□ 0.5
MMADHC-201ENST00000303319 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
MMADHC-201ENST00000303319 FGD5Q6ZNL6 1462 aa18.12■□□□□ 0.49
MMADHC-201ENST00000303319 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
MMADHC-201ENST00000303319 SOGA1O94964 1423 aa18.07■□□□□ 0.48
MMADHC-201ENST00000303319 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
MMADHC-201ENST00000303319 APLP2Q06481 763 aa18.02■□□□□ 0.48
MMADHC-201ENST00000303319 CUX2O14529 1486 aa18.01■□□□□ 0.47
MMADHC-201ENST00000303319 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
MMADHC-201ENST00000303319 EEA1Q15075 1411 aa18■□□□□ 0.47
MMADHC-201ENST00000303319 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
MMADHC-201ENST00000303319 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
MMADHC-201ENST00000303319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
MMADHC-201ENST00000303319 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
MMADHC-201ENST00000303319 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
MMADHC-201ENST00000303319 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms