Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
FOXN1O15353 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
FOXN1O15353 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
FOXN1O15353 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.76■■■□□ 2.99
FOXN1O15353 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.73■■■□□ 2.99
FOXN1O15353 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
FOXN1O15353 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
FOXN1O15353 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
FOXN1O15353 AL391121.1-201ENST00000607967 1349 ntBASIC33.71■■■□□ 2.99
FOXN1O15353 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
FOXN1O15353 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.69■■■□□ 2.98
FOXN1O15353 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
FOXN1O15353 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.67■■■□□ 2.98
FOXN1O15353 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC33.67■■■□□ 2.98
FOXN1O15353 MIR3665-201ENST00000578708 105 ntBASIC33.66■■■□□ 2.98
FOXN1O15353 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.65■■■□□ 2.98
FOXN1O15353 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
FOXN1O15353 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
FOXN1O15353 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.63■■■□□ 2.97
FOXN1O15353 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC33.63■■■□□ 2.97
FOXN1O15353 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC33.62■■■□□ 2.97
FOXN1O15353 AC087741.3-201ENST00000624270 1347 ntBASIC33.6■■■□□ 2.97
FOXN1O15353 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC33.6■■■□□ 2.97
FOXN1O15353 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC33.58■■■□□ 2.97
FOXN1O15353 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
FOXN1O15353 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC33.57■■■□□ 2.96
FOXN1O15353 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33.56■■■□□ 2.96
FOXN1O15353 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
FOXN1O15353 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC33.56■■■□□ 2.96
FOXN1O15353 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
FOXN1O15353 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC33.52■■■□□ 2.96
FOXN1O15353 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
FOXN1O15353 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
FOXN1O15353 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
FOXN1O15353 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
FOXN1O15353 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.95
FOXN1O15353 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
FOXN1O15353 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.44■■■□□ 2.94
FOXN1O15353 ZNRF2P2-203ENST00000454624 420 ntBASIC33.44■■■□□ 2.94
FOXN1O15353 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
FOXN1O15353 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94
FOXN1O15353 AC044849.2-201ENST00000606596 710 ntBASIC33.42■■■□□ 2.94
FOXN1O15353 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.41■■■□□ 2.94
FOXN1O15353 DUX4L28-201ENST00000623687 678 ntBASIC33.41■■■□□ 2.94
FOXN1O15353 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
FOXN1O15353 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
FOXN1O15353 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.36■■■□□ 2.93
FOXN1O15353 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC33.33■■■□□ 2.93
FOXN1O15353 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC33.33■■■□□ 2.93
FOXN1O15353 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.33■■■□□ 2.93
FOXN1O15353 MIR4449-201ENST00000578365 66 ntBASIC33.31■■■□□ 2.92
FOXN1O15353 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
FOXN1O15353 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
FOXN1O15353 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
FOXN1O15353 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.27■■■□□ 2.92
FOXN1O15353 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC33.27■■■□□ 2.92
FOXN1O15353 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.24■■■□□ 2.91
FOXN1O15353 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
FOXN1O15353 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
FOXN1O15353 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
FOXN1O15353 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
FOXN1O15353 AL133380.1-201ENST00000506013 324 ntBASIC33.2■■■□□ 2.91
FOXN1O15353 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.17■■■□□ 2.9
FOXN1O15353 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
FOXN1O15353 HSD17B1P1-201ENST00000590052 955 ntBASIC33.15■■■□□ 2.9
FOXN1O15353 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
FOXN1O15353 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
FOXN1O15353 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
FOXN1O15353 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.1■■■□□ 2.89
FOXN1O15353 CHML-205ENST00000638160 705 ntTSL 3 BASIC33.1■■■□□ 2.89
FOXN1O15353 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC33.1■■■□□ 2.89
FOXN1O15353 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
FOXN1O15353 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.07■■■□□ 2.88
FOXN1O15353 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC33.06■■■□□ 2.88
FOXN1O15353 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
FOXN1O15353 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
FOXN1O15353 BOD1-206ENST00000480951 814 ntTSL 2 BASIC33.05■■■□□ 2.88
FOXN1O15353 MIR639-201ENST00000384974 98 ntBASIC33.04■■■□□ 2.88
FOXN1O15353 MIR762-201ENST00000390236 83 ntBASIC33.04■■■□□ 2.88
FOXN1O15353 AC005559.1-201ENST00000589661 871 ntBASIC33.04■■■□□ 2.88
FOXN1O15353 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.03■■■□□ 2.88
FOXN1O15353 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
FOXN1O15353 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
FOXN1O15353 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
FOXN1O15353 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
FOXN1O15353 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33■■■□□ 2.87
FOXN1O15353 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
FOXN1O15353 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
FOXN1O15353 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
FOXN1O15353 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
FOXN1O15353 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
FOXN1O15353 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
FOXN1O15353 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
FOXN1O15353 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
FOXN1O15353 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
FOXN1O15353 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.91■■■□□ 2.86
FOXN1O15353 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
FOXN1O15353 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
FOXN1O15353 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
FOXN1O15353 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms