Protein–RNA interactions for Protein: A6NJZ7

RIMBP3C, RIMS-binding protein 3C, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3CA6NJZ7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC47.16■■■■■ 5.14
RIMBP3CA6NJZ7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC47.16■■■■■ 5.14
RIMBP3CA6NJZ7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC47.14■■■■■ 5.14
RIMBP3CA6NJZ7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC47.14■■■■■ 5.14
RIMBP3CA6NJZ7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC47.12■■■■■ 5.13
RIMBP3CA6NJZ7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC47.11■■■■■ 5.13
RIMBP3CA6NJZ7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC47.11■■■■■ 5.13
RIMBP3CA6NJZ7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC47.1■■■■■ 5.13
RIMBP3CA6NJZ7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC47.08■■■■■ 5.13
RIMBP3CA6NJZ7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC47.05■■■■■ 5.12
RIMBP3CA6NJZ7 DUX4L28-201ENST00000623687 678 ntBASIC47.05■■■■■ 5.12
RIMBP3CA6NJZ7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC47.04■■■■■ 5.12
RIMBP3CA6NJZ7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC47.04■■■■■ 5.12
RIMBP3CA6NJZ7 AC044849.2-201ENST00000606596 710 ntBASIC47.01■■■■■ 5.12
RIMBP3CA6NJZ7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC46.96■■■■■ 5.11
RIMBP3CA6NJZ7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC46.94■■■■■ 5.1
RIMBP3CA6NJZ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC46.92■■■■■ 5.1
RIMBP3CA6NJZ7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC46.88■■■■■ 5.1
RIMBP3CA6NJZ7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC46.84■■■■■ 5.09
RIMBP3CA6NJZ7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC46.83■■■■■ 5.09
RIMBP3CA6NJZ7 MIR4449-201ENST00000578365 66 ntBASIC46.81■■■■■ 5.08
RIMBP3CA6NJZ7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC46.8■■■■■ 5.08
RIMBP3CA6NJZ7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC46.79■■■■■ 5.08
RIMBP3CA6NJZ7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC46.76■■■■■ 5.08
RIMBP3CA6NJZ7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC46.76■■■■■ 5.08
RIMBP3CA6NJZ7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC46.76■■■■■ 5.08
RIMBP3CA6NJZ7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC46.76■■■■■ 5.08
RIMBP3CA6NJZ7 ZNRF2P2-203ENST00000454624 420 ntBASIC46.76■■■■■ 5.08
RIMBP3CA6NJZ7 AL133380.1-201ENST00000506013 324 ntBASIC46.73■■■■■ 5.07
RIMBP3CA6NJZ7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC46.72■■■■■ 5.07
RIMBP3CA6NJZ7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC46.65■■■■■ 5.06
RIMBP3CA6NJZ7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC46.65■■■■■ 5.06
RIMBP3CA6NJZ7 HSD17B1P1-201ENST00000590052 955 ntBASIC46.6■■■■■ 5.05
RIMBP3CA6NJZ7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC46.58■■■■■ 5.05
RIMBP3CA6NJZ7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC46.58■■■■■ 5.05
RIMBP3CA6NJZ7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC46.57■■■■■ 5.05
RIMBP3CA6NJZ7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC46.54■■■■■ 5.04
RIMBP3CA6NJZ7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC46.52■■■■■ 5.04
RIMBP3CA6NJZ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC46.52■■■■■ 5.04
RIMBP3CA6NJZ7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC46.5■■■■■ 5.04
RIMBP3CA6NJZ7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC46.5■■■■■ 5.03
RIMBP3CA6NJZ7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC46.46■■■■■ 5.03
RIMBP3CA6NJZ7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC46.45■■■■■ 5.03
RIMBP3CA6NJZ7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC46.45■■■■■ 5.03
RIMBP3CA6NJZ7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC46.39■■■■■ 5.02
RIMBP3CA6NJZ7 AC005559.1-201ENST00000589661 871 ntBASIC46.39■■■■■ 5.02
RIMBP3CA6NJZ7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC46.39■■■■■ 5.02
RIMBP3CA6NJZ7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC46.36■■■■■ 5.01
RIMBP3CA6NJZ7 CHML-205ENST00000638160 705 ntTSL 3 BASIC46.35■■■■■ 5.01
RIMBP3CA6NJZ7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC46.33■■■■■ 5.01
RIMBP3CA6NJZ7 MIR639-201ENST00000384974 98 ntBASIC46.32■■■■■ 5.01
RIMBP3CA6NJZ7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC46.32■■■■■ 5
RIMBP3CA6NJZ7 MIR762-201ENST00000390236 83 ntBASIC46.32■■■■■ 5
RIMBP3CA6NJZ7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC46.32■■■■■ 5
RIMBP3CA6NJZ7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC46.31■■■■■ 5
RIMBP3CA6NJZ7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC46.29■■■■■ 5
RIMBP3CA6NJZ7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC46.29■■■■■ 5
RIMBP3CA6NJZ7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC46.28■■■■■ 5
RIMBP3CA6NJZ7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC46.21■■■■■ 4.99
RIMBP3CA6NJZ7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC46.21■■■■■ 4.99
RIMBP3CA6NJZ7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC46.19■■■■■ 4.98
RIMBP3CA6NJZ7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC46.14■■■■■ 4.98
RIMBP3CA6NJZ7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC46.14■■■■■ 4.98
RIMBP3CA6NJZ7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC46.13■■■■■ 4.97
RIMBP3CA6NJZ7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC46.12■■■■■ 4.97
RIMBP3CA6NJZ7 MVK-208ENST00000539696 608 ntTSL 5 BASIC46.12■■■■■ 4.97
RIMBP3CA6NJZ7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC46.12■■■■■ 4.97
RIMBP3CA6NJZ7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC46.1■■■■■ 4.97
RIMBP3CA6NJZ7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC46.09■■■■■ 4.97
RIMBP3CA6NJZ7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC46.07■■■■■ 4.97
RIMBP3CA6NJZ7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC46.07■■■■■ 4.97
RIMBP3CA6NJZ7 AC145285.7-201ENST00000614819 1539 ntBASIC46.04■■■■■ 4.96
RIMBP3CA6NJZ7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC46.04■■■■■ 4.96
RIMBP3CA6NJZ7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC46.02■■■■■ 4.96
RIMBP3CA6NJZ7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC46.01■■■■■ 4.96
RIMBP3CA6NJZ7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC46.01■■■■■ 4.96
RIMBP3CA6NJZ7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC45.99■■■■■ 4.95
RIMBP3CA6NJZ7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC45.96■■■■■ 4.95
RIMBP3CA6NJZ7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC45.96■■■■■ 4.95
RIMBP3CA6NJZ7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC45.95■■■■■ 4.95
RIMBP3CA6NJZ7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC45.92■■■■■ 4.94
RIMBP3CA6NJZ7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC45.92■■■■■ 4.94
RIMBP3CA6NJZ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC45.86■■■■■ 4.93
RIMBP3CA6NJZ7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC45.84■■■■■ 4.93
RIMBP3CA6NJZ7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC45.81■■■■■ 4.92
RIMBP3CA6NJZ7 AC016575.1-201ENST00000607026 382 ntBASIC45.81■■■■■ 4.92
RIMBP3CA6NJZ7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC45.81■■■■■ 4.92
RIMBP3CA6NJZ7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC45.8■■■■■ 4.92
RIMBP3CA6NJZ7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC45.78■■■■■ 4.92
RIMBP3CA6NJZ7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC45.78■■■■■ 4.92
RIMBP3CA6NJZ7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC45.77■■■■■ 4.92
RIMBP3CA6NJZ7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC45.75■■■■■ 4.91
RIMBP3CA6NJZ7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC45.74■■■■■ 4.91
RIMBP3CA6NJZ7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC45.74■■■■■ 4.91
RIMBP3CA6NJZ7 ABHD17AP3-201ENST00000503096 1137 ntBASIC45.73■■■■■ 4.91
RIMBP3CA6NJZ7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC45.73■■■■■ 4.91
RIMBP3CA6NJZ7 MIR3648-2-201ENST00000581792 180 ntBASIC45.72■■■■■ 4.91
RIMBP3CA6NJZ7 MIR3648-1-201ENST00000615959 180 ntBASIC45.72■■■■■ 4.91
RIMBP3CA6NJZ7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC45.69■■■■■ 4.9
RIMBP3CA6NJZ7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC45.68■■■■■ 4.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms