Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
C13orf42A0A1B0GVH6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
C13orf42A0A1B0GVH6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
C13orf42A0A1B0GVH6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
C13orf42A0A1B0GVH6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
C13orf42A0A1B0GVH6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
C13orf42A0A1B0GVH6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
C13orf42A0A1B0GVH6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
C13orf42A0A1B0GVH6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
C13orf42A0A1B0GVH6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.27■■□□□ 1.32
C13orf42A0A1B0GVH6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
C13orf42A0A1B0GVH6 AC015813.7-201ENST00000623294 581 ntBASIC23.26■■□□□ 1.31
C13orf42A0A1B0GVH6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C13orf42A0A1B0GVH6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
C13orf42A0A1B0GVH6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C13orf42A0A1B0GVH6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
C13orf42A0A1B0GVH6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
C13orf42A0A1B0GVH6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
C13orf42A0A1B0GVH6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C13orf42A0A1B0GVH6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
C13orf42A0A1B0GVH6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.17■■□□□ 1.3
C13orf42A0A1B0GVH6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C13orf42A0A1B0GVH6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C13orf42A0A1B0GVH6 ABCB10P1-201ENST00000614297 2181 ntBASIC23.16■■□□□ 1.3
C13orf42A0A1B0GVH6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C13orf42A0A1B0GVH6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C13orf42A0A1B0GVH6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.15■■□□□ 1.3
C13orf42A0A1B0GVH6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
C13orf42A0A1B0GVH6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.1■■□□□ 1.29
C13orf42A0A1B0GVH6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
C13orf42A0A1B0GVH6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
C13orf42A0A1B0GVH6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
C13orf42A0A1B0GVH6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
C13orf42A0A1B0GVH6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
C13orf42A0A1B0GVH6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
C13orf42A0A1B0GVH6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
C13orf42A0A1B0GVH6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
C13orf42A0A1B0GVH6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23.05■■□□□ 1.28
C13orf42A0A1B0GVH6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.05■■□□□ 1.28
C13orf42A0A1B0GVH6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
C13orf42A0A1B0GVH6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.04■■□□□ 1.28
C13orf42A0A1B0GVH6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
C13orf42A0A1B0GVH6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
C13orf42A0A1B0GVH6 ABCB10P3-201ENST00000561950 2166 ntBASIC23.04■■□□□ 1.28
C13orf42A0A1B0GVH6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
C13orf42A0A1B0GVH6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
C13orf42A0A1B0GVH6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
C13orf42A0A1B0GVH6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
C13orf42A0A1B0GVH6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
C13orf42A0A1B0GVH6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
C13orf42A0A1B0GVH6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
C13orf42A0A1B0GVH6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
C13orf42A0A1B0GVH6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
C13orf42A0A1B0GVH6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
C13orf42A0A1B0GVH6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23■■□□□ 1.27
C13orf42A0A1B0GVH6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.99■■□□□ 1.27
C13orf42A0A1B0GVH6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
C13orf42A0A1B0GVH6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
C13orf42A0A1B0GVH6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
C13orf42A0A1B0GVH6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
C13orf42A0A1B0GVH6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
C13orf42A0A1B0GVH6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.97■■□□□ 1.27
C13orf42A0A1B0GVH6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
C13orf42A0A1B0GVH6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
C13orf42A0A1B0GVH6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
C13orf42A0A1B0GVH6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
C13orf42A0A1B0GVH6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
C13orf42A0A1B0GVH6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
C13orf42A0A1B0GVH6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
C13orf42A0A1B0GVH6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
C13orf42A0A1B0GVH6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
C13orf42A0A1B0GVH6 AC006077.2-201ENST00000623591 457 ntBASIC22.92■■□□□ 1.26
C13orf42A0A1B0GVH6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
C13orf42A0A1B0GVH6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
C13orf42A0A1B0GVH6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
C13orf42A0A1B0GVH6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
C13orf42A0A1B0GVH6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
C13orf42A0A1B0GVH6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
C13orf42A0A1B0GVH6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
C13orf42A0A1B0GVH6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
C13orf42A0A1B0GVH6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
C13orf42A0A1B0GVH6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
C13orf42A0A1B0GVH6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
C13orf42A0A1B0GVH6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
C13orf42A0A1B0GVH6 AL161658.1-201ENST00000623641 1967 ntBASIC22.83■■□□□ 1.25
C13orf42A0A1B0GVH6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
C13orf42A0A1B0GVH6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
C13orf42A0A1B0GVH6 AC139426.1-201ENST00000568218 2529 ntBASIC22.81■■□□□ 1.24
C13orf42A0A1B0GVH6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
C13orf42A0A1B0GVH6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.81■■□□□ 1.24
C13orf42A0A1B0GVH6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
C13orf42A0A1B0GVH6 ZNRF2P1-201ENST00000441407 443 ntBASIC22.8■■□□□ 1.24
C13orf42A0A1B0GVH6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
C13orf42A0A1B0GVH6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
C13orf42A0A1B0GVH6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.79■■□□□ 1.24
C13orf42A0A1B0GVH6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
C13orf42A0A1B0GVH6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
C13orf42A0A1B0GVH6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
C13orf42A0A1B0GVH6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.77■■□□□ 1.24
C13orf42A0A1B0GVH6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.77■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms