Protein–RNA interactions for Protein: A0A1B0GTE1

LOC100289279, Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100289279A0A1B0GTE1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LOC100289279A0A1B0GTE1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LOC100289279A0A1B0GTE1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LOC100289279A0A1B0GTE1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LOC100289279A0A1B0GTE1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LOC100289279A0A1B0GTE1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LOC100289279A0A1B0GTE1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LOC100289279A0A1B0GTE1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.36■■□□□ 1.49
LOC100289279A0A1B0GTE1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LOC100289279A0A1B0GTE1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.35■■□□□ 1.49
LOC100289279A0A1B0GTE1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.34■■□□□ 1.49
LOC100289279A0A1B0GTE1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
LOC100289279A0A1B0GTE1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LOC100289279A0A1B0GTE1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LOC100289279A0A1B0GTE1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LOC100289279A0A1B0GTE1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100289279A0A1B0GTE1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100289279A0A1B0GTE1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100289279A0A1B0GTE1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LOC100289279A0A1B0GTE1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LOC100289279A0A1B0GTE1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LOC100289279A0A1B0GTE1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
LOC100289279A0A1B0GTE1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.28■■□□□ 1.48
LOC100289279A0A1B0GTE1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
LOC100289279A0A1B0GTE1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
LOC100289279A0A1B0GTE1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.26■■□□□ 1.47
LOC100289279A0A1B0GTE1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
LOC100289279A0A1B0GTE1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LOC100289279A0A1B0GTE1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.26■■□□□ 1.47
LOC100289279A0A1B0GTE1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.25■■□□□ 1.47
LOC100289279A0A1B0GTE1 AL031258.1-201ENST00000623562 325 ntBASIC24.25■■□□□ 1.47
LOC100289279A0A1B0GTE1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.24■■□□□ 1.47
LOC100289279A0A1B0GTE1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
LOC100289279A0A1B0GTE1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LOC100289279A0A1B0GTE1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LOC100289279A0A1B0GTE1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LOC100289279A0A1B0GTE1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.2■■□□□ 1.46
LOC100289279A0A1B0GTE1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LOC100289279A0A1B0GTE1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LOC100289279A0A1B0GTE1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LOC100289279A0A1B0GTE1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.16■■□□□ 1.46
LOC100289279A0A1B0GTE1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.16■■□□□ 1.46
LOC100289279A0A1B0GTE1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.15■■□□□ 1.46
LOC100289279A0A1B0GTE1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LOC100289279A0A1B0GTE1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
LOC100289279A0A1B0GTE1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.13■■□□□ 1.45
LOC100289279A0A1B0GTE1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LOC100289279A0A1B0GTE1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.13■■□□□ 1.45
LOC100289279A0A1B0GTE1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LOC100289279A0A1B0GTE1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LOC100289279A0A1B0GTE1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.11■■□□□ 1.45
LOC100289279A0A1B0GTE1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.11■■□□□ 1.45
LOC100289279A0A1B0GTE1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LOC100289279A0A1B0GTE1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
LOC100289279A0A1B0GTE1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LOC100289279A0A1B0GTE1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.09■■□□□ 1.45
LOC100289279A0A1B0GTE1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
LOC100289279A0A1B0GTE1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LOC100289279A0A1B0GTE1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LOC100289279A0A1B0GTE1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LOC100289279A0A1B0GTE1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LOC100289279A0A1B0GTE1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LOC100289279A0A1B0GTE1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.03■■□□□ 1.44
LOC100289279A0A1B0GTE1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LOC100289279A0A1B0GTE1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
LOC100289279A0A1B0GTE1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.02■■□□□ 1.44
LOC100289279A0A1B0GTE1 RARRES2P7-201ENST00000567349 469 ntBASIC24.02■■□□□ 1.44
LOC100289279A0A1B0GTE1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
LOC100289279A0A1B0GTE1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LOC100289279A0A1B0GTE1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LOC100289279A0A1B0GTE1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
LOC100289279A0A1B0GTE1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LOC100289279A0A1B0GTE1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.98■■□□□ 1.43
LOC100289279A0A1B0GTE1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.98■■□□□ 1.43
LOC100289279A0A1B0GTE1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.96■■□□□ 1.43
LOC100289279A0A1B0GTE1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
LOC100289279A0A1B0GTE1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.94■■□□□ 1.42
LOC100289279A0A1B0GTE1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LOC100289279A0A1B0GTE1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.93■■□□□ 1.42
LOC100289279A0A1B0GTE1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LOC100289279A0A1B0GTE1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.93■■□□□ 1.42
LOC100289279A0A1B0GTE1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
LOC100289279A0A1B0GTE1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LOC100289279A0A1B0GTE1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LOC100289279A0A1B0GTE1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.9■■□□□ 1.42
LOC100289279A0A1B0GTE1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.89■■□□□ 1.41
LOC100289279A0A1B0GTE1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
LOC100289279A0A1B0GTE1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.89■■□□□ 1.41
LOC100289279A0A1B0GTE1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.88■■□□□ 1.41
LOC100289279A0A1B0GTE1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LOC100289279A0A1B0GTE1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
LOC100289279A0A1B0GTE1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.87■■□□□ 1.41
LOC100289279A0A1B0GTE1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LOC100289279A0A1B0GTE1 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.87■■□□□ 1.41
LOC100289279A0A1B0GTE1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.86■■□□□ 1.41
LOC100289279A0A1B0GTE1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LOC100289279A0A1B0GTE1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LOC100289279A0A1B0GTE1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.84■■□□□ 1.41
LOC100289279A0A1B0GTE1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LOC100289279A0A1B0GTE1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms