Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV22A0A0B4J277 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV22A0A0B4J277 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV22A0A0B4J277 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV22A0A0B4J277 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV22A0A0B4J277 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV22A0A0B4J277 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV22A0A0B4J277 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV22A0A0B4J277 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 SHF-206ENST00000560471 2499 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV22A0A0B4J277 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 ABCB10P3-201ENST00000561950 2166 ntBASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV22A0A0B4J277 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV22A0A0B4J277 AC145285.7-201ENST00000614819 1539 ntBASIC15.78■□□□□ 0.12
TRAV22A0A0B4J277 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV22A0A0B4J277 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV22A0A0B4J277 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV22A0A0B4J277 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV22A0A0B4J277 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV22A0A0B4J277 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV22A0A0B4J277 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV22A0A0B4J277 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV22A0A0B4J277 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV22A0A0B4J277 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV22A0A0B4J277 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV22A0A0B4J277 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 ABCB10P1-201ENST00000614297 2181 ntBASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV22A0A0B4J277 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV22A0A0B4J277 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV22A0A0B4J277 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV22A0A0B4J277 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV22A0A0B4J277 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV22A0A0B4J277 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV22A0A0B4J277 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV22A0A0B4J277 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV22A0A0B4J277 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV22A0A0B4J277 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV22A0A0B4J277 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV22A0A0B4J277 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV22A0A0B4J277 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV22A0A0B4J277 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV22A0A0B4J277 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV22A0A0B4J277 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV22A0A0B4J277 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV22A0A0B4J277 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV22A0A0B4J277 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV22A0A0B4J277 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV22A0A0B4J277 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV22A0A0B4J277 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV22A0A0B4J277 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV22A0A0B4J277 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV22A0A0B4J277 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV22A0A0B4J277 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV22A0A0B4J277 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV22A0A0B4J277 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV22A0A0B4J277 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV22A0A0B4J277 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV22A0A0B4J277 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV22A0A0B4J277 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV22A0A0B4J277 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV22A0A0B4J277 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV22A0A0B4J277 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV22A0A0B4J277 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms