Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAV12-3A0A0B4J271 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV12-3A0A0B4J271 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV12-3A0A0B4J271 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV12-3A0A0B4J271 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRAV12-3A0A0B4J271 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRAV12-3A0A0B4J271 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRAV12-3A0A0B4J271 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
TRAV12-3A0A0B4J271 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRAV12-3A0A0B4J271 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV12-3A0A0B4J271 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRAV12-3A0A0B4J271 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV12-3A0A0B4J271 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.46■□□□□ 0.87
TRAV12-3A0A0B4J271 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV12-3A0A0B4J271 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV12-3A0A0B4J271 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV12-3A0A0B4J271 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV12-3A0A0B4J271 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV12-3A0A0B4J271 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV12-3A0A0B4J271 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV12-3A0A0B4J271 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV12-3A0A0B4J271 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV12-3A0A0B4J271 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV12-3A0A0B4J271 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV12-3A0A0B4J271 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.42■□□□□ 0.86
TRAV12-3A0A0B4J271 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAV12-3A0A0B4J271 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAV12-3A0A0B4J271 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV12-3A0A0B4J271 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV12-3A0A0B4J271 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV12-3A0A0B4J271 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
TRAV12-3A0A0B4J271 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRAV12-3A0A0B4J271 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV12-3A0A0B4J271 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV12-3A0A0B4J271 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.38■□□□□ 0.85
TRAV12-3A0A0B4J271 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV12-3A0A0B4J271 DYNLL1-208ENST00000550178 581 ntBASIC20.38■□□□□ 0.85
TRAV12-3A0A0B4J271 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV12-3A0A0B4J271 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRAV12-3A0A0B4J271 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV12-3A0A0B4J271 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV12-3A0A0B4J271 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV12-3A0A0B4J271 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV12-3A0A0B4J271 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRAV12-3A0A0B4J271 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV12-3A0A0B4J271 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV12-3A0A0B4J271 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV12-3A0A0B4J271 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-3A0A0B4J271 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-3A0A0B4J271 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV12-3A0A0B4J271 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV12-3A0A0B4J271 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV12-3A0A0B4J271 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV12-3A0A0B4J271 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
TRAV12-3A0A0B4J271 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV12-3A0A0B4J271 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV12-3A0A0B4J271 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV12-3A0A0B4J271 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAV12-3A0A0B4J271 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV12-3A0A0B4J271 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV12-3A0A0B4J271 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV12-3A0A0B4J271 AC120057.4-201ENST00000624722 1615 ntBASIC20.27■□□□□ 0.83
TRAV12-3A0A0B4J271 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV12-3A0A0B4J271 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV12-3A0A0B4J271 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV12-3A0A0B4J271 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV12-3A0A0B4J271 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV12-3A0A0B4J271 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV12-3A0A0B4J271 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV12-3A0A0B4J271 AP002365.1-201ENST00000603448 772 ntBASIC20.24■□□□□ 0.83
TRAV12-3A0A0B4J271 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV12-3A0A0B4J271 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV12-3A0A0B4J271 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRAV12-3A0A0B4J271 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV12-3A0A0B4J271 AL031258.1-201ENST00000623562 325 ntBASIC20.22■□□□□ 0.83
TRAV12-3A0A0B4J271 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV12-3A0A0B4J271 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV12-3A0A0B4J271 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV12-3A0A0B4J271 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV12-3A0A0B4J271 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV12-3A0A0B4J271 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
TRAV12-3A0A0B4J271 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV12-3A0A0B4J271 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV12-3A0A0B4J271 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV12-3A0A0B4J271 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV12-3A0A0B4J271 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV12-3A0A0B4J271 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAV12-3A0A0B4J271 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV12-3A0A0B4J271 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV12-3A0A0B4J271 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV12-3A0A0B4J271 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAV12-3A0A0B4J271 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV12-3A0A0B4J271 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV12-3A0A0B4J271 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV12-3A0A0B4J271 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRAV12-3A0A0B4J271 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV12-3A0A0B4J271 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV12-3A0A0B4J271 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV12-3A0A0B4J271 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV12-3A0A0B4J271 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms